RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 RHBGQ9H310 441 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 RANGRFQ9HD47 186 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-202ENST00000367279 DIMT1Q9UNQ2 313 aaKnown RBP11.61□□□□□ -0.55
PTPN7-202ENST00000367279 MN1Q10571 1320 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-202ENST00000367279 A0A087WUU8 490 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 CD8B2A6NJW9 211 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 FGF19O95750 216 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 CD8BP10966 210 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 PSKH1P11801 424 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 GNSP15586 552 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 SLC9A3P48764 834 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 SLC16A1P53985 500 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 CDH11P55287 796 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 RAB25P57735 213 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 TAS2R38P59533 333 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 REEP5Q00765 189 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 GPR50Q13585 617 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 OCLNQ16625 522 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 PIP5KL1Q5T9C9 394 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 SLC36A4Q6YBV0 504 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 ABI3BPQ7Z7G0 1075 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 KIF18BQ86Y91 864 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 OTUB2Q96DC9 234 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 TOX2Q96NM4 488 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 MIXL1Q9H2W2 232 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 ATG4BQ9Y4P1 393 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 PCDHGB2Q9Y5G2 931 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 CLCA3PQ9Y6N3 262 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 MYO9BQ13459 2157 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 C2orf92A0A1B0GVN3 265 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 A0A1W2PRQ8 180 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 SNTNA6NMZ2 147 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 FAM25AB3EWG3 89 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 FAM25CB3EWG5 89 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 FAM25GB3EWG6 89 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 TP53P04637 393 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-202ENST00000367279 MSL3P1P0C860 447 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 CERS1P27544 350 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 MC3RP41968 323 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 CHRNEQ04844 493 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 DGLUCYQ7Z3D6 616 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 MARCH9Q86YJ5 346 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 FAM26EQ8N5C1 309 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 NLGN4YQ8NFZ3 816 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-202ENST00000367279 CREB3L4Q8TEY5 395 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 LINC00615Q96LM1 132 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-202ENST00000367279 TMEM246Q9BRR3 403 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 MAN2C1Q9NTJ4 1040 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 MARK1Q9P0L2 795 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 H2AFY2Q9P0M6 372 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-202ENST00000367279 GPR55Q9Y2T6 319 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-202ENST00000367279 GPSM3Q9Y4H4 160 aa11.61□□□□□ -0.55
PTPN7-202ENST00000367279 CHD7Q9P2D1 2997 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 TRBV23OR9-2A0A075B6M9 112 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 FAM183AA6NL82 134 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 C1QTNF3-AMACRE9PGA6 284 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 HPGDSO60760 199 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 CSF3P09919 207 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 MYL9P24844 172 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 IFNA8P32881 189 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 DUSP2Q05923 314 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 QPRTQ15274 297 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 FLYWCH1Q4VC44 716 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 PAMR1Q6UXH9 720 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 PLEKHM3Q6ZWE6 761 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 ZNF513Q8N8E2 541 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-202ENST00000367279 OR9A2Q8NGT5 310 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 TRIM43Q96BQ3 446 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-202ENST00000367279 PRRC1Q96M27 445 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 GFM1Q96RP9 751 aaKnown RBP11.6□□□□□ -0.55
PTPN7-202ENST00000367279 INSM2Q96T92 566 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-202ENST00000367279 OR2B2Q9GZK3 357 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 MRPS30Q9NP92 439 aaKnown RBP11.6□□□□□ -0.55
PTPN7-202ENST00000367279 MBNL1Q9NR56 388 aaKnown RBP11.6□□□□□ -0.55
PTPN7-202ENST00000367279 GRIP1Q9Y3R0 1128 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 ALPPP05187 535 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 GJA8P48165 433 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 CLDN2P57739 230 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 RGS8P57771 180 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-202ENST00000367279 FABP5Q01469 135 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 COX10Q12887 443 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 LTB4RQ15722 352 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 WSCD2Q2TBF2 565 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 SMARCD3Q6STE5 483 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 NANOGNBQ7Z5D8 188 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 NATD1Q8N6N6 113 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 OR8D4Q8NGM9 314 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 BBS10Q8TAM1 723 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 SETD6Q8TBK2 473 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 HCAR2Q8TDS4 363 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 CAPN10Q9HC96 672 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 PLEKHB1Q9UF11 243 aaPredicted RBP11.6□□□□□ -0.55
PTPN7-202ENST00000367279 TRAPPC4Q9Y296 219 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 CSNK1G3Q9Y6M4 447 aa11.6□□□□□ -0.55
PTPN7-202ENST00000367279 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.59□□□□□ -0.55
PTPN7-202ENST00000367279 IL1AP01583 271 aa11.59□□□□□ -0.55
PTPN7-202ENST00000367279 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms