RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 OR4C11Q6IEV9 310 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 GRHL2Q6ISB3 625 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 METTL2BQ6P1Q9 378 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 FRMD7Q6ZUT3 714 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 YTHDF3Q7Z739 585 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 GPR180Q86V85 440 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 LACC1Q8IV20 430 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 WDR75Q8IWA0 830 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ULK2Q8IYT8 1036 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 LRRC25Q8N386 305 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ZCCHC7Q8N3Z6 543 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 CCNYL1Q8N7R7 359 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 PTGR2Q8N8N7 351 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 RFWD2Q8NHY2 731 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 FAM222BQ8WU58 562 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 UBTD2Q8WUN7 234 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ANKRD9Q96BM1 317 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 TMEM237Q96Q45 408 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ALPK1Q96QP1 1244 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 GPATCH1Q9BRR8 931 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 LYARQ9NX58 379 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 SPRR3Q9UBC9 169 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ANGPTL3Q9Y5C1 460 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ITPR3Q14573 2671 aa11.4□□□□□ -0.59
MRPL55-209ENST00000366735 MPDZO75970 2070 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 ERICH4A6NGS2 130 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 CCT8L1PA6NM43 557 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 A6NNC1 897 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 AHRRA9YTQ3 701 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 SLCO1B7G3V0H7 640 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 K7EPI3 171 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 GFAPP14136 432 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 EPB42P16452 691 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 KLK2P20151 261 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 ENDOUP21128 410 aaKnown RBP11.39□□□□□ -0.59
MRPL55-209ENST00000366735 BMP5P22003 454 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 GALNSP34059 522 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 GCKP35557 465 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 PIK3CBP42338 1070 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 MASP1P48740 699 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 ARFIP2P53365 341 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 NRG3P56975 720 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 ERVK-8P63133 956 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 DMTNQ08495 405 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 RPS6KA2Q15349 733 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 NTRK2Q16620 822 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 PFKFB4Q16877 469 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 UNC50Q53HI1 259 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 DEPDC1Q5TB30 811 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 HLA-DQA1Q5Y7H0 255 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 CYP20A1Q6UW02 462 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 KIF18BQ86Y91 864 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 MYLK4Q86YV6 388 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-209ENST00000366735 OR7G3Q8NG95 312 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 RNASE6Q93091 150 aaKnown RBP11.39□□□□□ -0.59
MRPL55-209ENST00000366735 ESAMQ96AP7 390 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 WWTR1Q9GZV5 400 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 SLC6A15Q9H2J7 730 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 GSTO2Q9H4Y5 243 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 EML4Q9HC35 981 aaKnown RBP11.39□□□□□ -0.59
MRPL55-209ENST00000366735 RASSF1Q9NS23 344 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 ZNF629Q9UEG4 869 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-209ENST00000366735 ERVK-19Q9WJR5 959 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 ABCA4P78363 2273 aa11.39□□□□□ -0.59
MRPL55-209ENST00000366735 SAP18O00422 153 aaKnown RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 SYT5O00445 386 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 ZNF195O14628 629 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 ZNF354AO60765 605 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 PRAMEF4O60810 478 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 SH3BGRLO75368 114 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 DCTN3O75935 186 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 SNX4O95219 450 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 CHRNGP07510 517 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 RPS17P08708 135 aaKnown RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 NR2F6P10588 404 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 TIMP3P35625 211 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 RPL14P50914 215 aaKnown RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 DLX5P56178 289 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 IFT88Q13099 833 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 SETDB1Q15047 1291 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 EBPQ15125 230 aaKnown RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 PCBP2Q15366 365 aaKnown RBP eCLIP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 FBXL19-AS1Q494R0 122 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 ACSF3Q4G176 576 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-209ENST00000366735 SPDYAQ5MJ70 313 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 PRAMEF9Q5VWM5 478 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 TRPM8Q7Z2W7 1104 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 UBE3DQ7Z6J8 389 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 LIX1LQ8IVB5 337 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 OR4N5Q8IXE1 308 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 ZNF781Q8N8C0 355 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 OR10G3Q8NGC4 313 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 HUS1BQ8NHY5 278 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 NRGNQ92686 78 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 DIO2Q92813 273 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 RIT1Q92963 219 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 PHF21BQ96EK2 531 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 DTNBP1Q96EV8 351 aa11.38□□□□□ -0.59
MRPL55-209ENST00000366735 SECISBP2Q96T21 854 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms