RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 VN1R1Q9GZP7 353 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 IL22Q9GZX6 179 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 KCNK13Q9HB14 408 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 CHST11Q9NPF2 352 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 FAM114A2Q9NRY5 505 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 BFARQ9NZS9 450 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 HCN3Q9P1Z3 774 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 TEKT2Q9UIF3 430 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 CSMD1Q96PZ7 3565 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 OTOGQ6ZRI0 2925 aa4.84□□□□□ -1.63
RNU4-4P-201ENST00000364588 ABCA12Q86UK0 2595 aa4.84□□□□□ -1.64
RNU4-4P-201ENST00000364588 ADGRG4Q8IZF6 3080 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 DCHS2Q6V1P9 2916 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CACNA1CQ13936 2221 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 ZNF860A6NHJ4 632 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 NPIPA5E9PKD4 350 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 H3BMM5 538 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 SGK494L7N484 410 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 TXNDC9O14530 226 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 PFDN6O15212 129 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 TTI1O43156 1089 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 AVILO75366 819 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 RDH16O75452 317 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CDC123O75794 336 aaPredicted RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CCNDBP1O95273 360 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 PLAUP00749 431 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 MBPP02686 304 aaPredicted RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 PKMP14618 531 aaKnown RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 OGNP20774 298 aaKnown RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 TNFSF4P23510 183 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 ATP5DP30049 168 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 NR4A2P43354 598 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 XCR1P46094 333 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 VPS41P49754 854 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 RIPPLY3P57055 190 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 KRTAP10-9P60411 292 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 AP2B1P63010 937 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 OC90Q02509 493 aaPredicted RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CBFBQ13951 182 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 FAM53BQ14153 422 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 ARHGAP19Q14CB8 494 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 SIX1Q15475 284 aaPredicted RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR1C1Q15619 314 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 TRIP13Q15645 432 aaPredicted RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CCNG2Q16589 344 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 NDUFA9Q16795 377 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 GLE1Q53GS7 698 aaKnown RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 SPINK14Q6IE38 97 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 NEPROQ6NW34 567 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 MTFR2Q6P444 385 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CASC4Q6P4E1 433 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 XKRXQ6PP77 449 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 C3P1Q6ZMU1 363 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CENPUQ71F23 418 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 VN1R4Q7Z5H5 301 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CPEB2Q7Z5Q1 589 aaKnown RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 ANKRD37Q7Z713 158 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CRLF3Q8IUI8 442 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 UEVLDQ8IX04 471 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR2C3Q8N628 320 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 PRELID2Q8N945 189 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 MDS2Q8NDY4 140 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR52L2PQ8NGH6 319 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 OR51Q1Q8NH59 317 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 AKAP1Q92667 903 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CCDC138Q96M89 665 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 GPR137Q96N19 417 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 NPAS2Q99743 824 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 KIFC1Q9BW19 673 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 EIF2B3Q9NR50 452 aaKnown RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 FBXO6Q9NRD1 293 aaPredicted RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 UTP6Q9NYH9 597 aaKnown RBP4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 GUCA1BQ9UMX6 200 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 NPIPA1Q9UND3 350 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 CELSR1Q9NYQ6 3014 aa4.83□□□□□ -1.64
RNU4-4P-201ENST00000364588 AKAP9Q99996 3911 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 FEZF1A0PJY2 475 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CTAGE9A4FU28 777 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 GABRR3A8MPY1 467 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 H0YIG0 161 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 GFYI3L273 518 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 AP3B1O00203 1094 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 NSA2O95478 260 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 CLDN14O95500 239 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ABOP16442 354 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 IMPA1P29218 277 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 EEF1DP29692 281 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 HSD17B2P37059 387 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 COILP38432 576 aaPredicted RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 SMSP52788 366 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ADARP55265 1226 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 TBPL1P62380 186 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 OLR1P78380 273 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ABATP80404 500 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ACTN3Q08043 901 aaPredicted RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 FHL3Q13643 280 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 PTK6Q13882 451 aa4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 DHX34Q14147 1143 aaKnown RBP4.82□□□□□ -1.64
RNU4-4P-201ENST00000364588 ABRAXAS2Q15018 415 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms