RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CRNNQ9UBG3 495 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ENTPD2Q9Y5L3 495 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 ORC6Q9Y5N6 252 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
CSNK1E-201ENST00000359867 OR2A25A4D2G3 310 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 RHPN2P1A8MT19 583 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 ITIH1P19827 911 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 IFNA8P32881 189 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 IQCCQ4KMZ1 466 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 AGAP7PQ5VUJ5 663 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 UBE2UQ5VVX9 321 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 ADCK1Q86TW2 530 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 UBE2FQ969M7 185 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 ZNF486Q96H40 463 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 OR2A14Q96R47 310 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 PRRX2Q99811 253 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 SLC35C2Q9NQQ7 365 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 SIRT3Q9NTG7 399 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 THUMPD1Q9NXG2 353 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 KLK4Q9Y5K2 254 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 ASCC3Q8N3C0 2202 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 ZFHX2Q9C0A1 2572 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 A0A0G2JN53 185 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 TMEM229AB2RXF0 380 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 hCG_2039718K7EN88 272 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 DLL1O00548 723 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 YKT6O15498 198 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 EPHA2P29317 976 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 MASP1P48740 699 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 PCBP3P57721 371 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 RGS1Q08116 209 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 NPTX1Q15818 432 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 NKAIN2Q5VXU1 208 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 RORBQ92753 470 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 GAL3ST3Q96A11 431 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 A4GALTQ9NPC4 353 aa13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 LYARQ9NX58 379 aaKnown RBP13.03□□□□□ -0.32
CSNK1E-201ENST00000359867 LY6G6EA0A0G2JKS1 128 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 MT-ND2P03891 347 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 ALPPL2P10696 532 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 IGFBP5P24593 272 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 GUSBP11Q6P575 273 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 C6orf120Q7Z4R8 191 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 ASPGQ86U10 573 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 OR8K5Q8NH50 307 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 DUSP23Q9BVJ7 150 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 ROGDIQ9GZN7 287 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 REEP1Q9H902 201 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 RASSF1Q9NS23 344 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 SEMA4GQ9NTN9 838 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 ACTR10Q9NZ32 417 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 U3KQA8 63 aa13.02□□□□□ -0.32
CSNK1E-201ENST00000359867 UNC13CQ8NB66 2214 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 CPED1A4D0V7 1026 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 C4orf51C9J302 202 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 M0QX08 132 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 RGS13O14921 159 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 UBXN7O94888 489 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 SLC34A2O95436 690 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF806P0C7X5 589 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 UGT2B7P16662 529 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 AQP1P29972 269 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 NTSP30990 170 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 CASP9P55211 416 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 OR1D5P58170 312 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 FOXD4Q12950 439 aaPredicted RBP13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 HSPB3Q12988 150 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 SPDYE7PQ495Y7 208 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 IFI44LQ53G44 452 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 REEP3Q6NUK4 255 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 FBXO42Q6P3S6 717 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 CEACAM20Q6UY09 585 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 LSM14AQ8ND56 463 aaKnown RBP13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 TM4SF19Q96DZ7 209 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 AMDHD1Q96NU7 426 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 EPYCQ99645 322 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 MACROD1Q9BQ69 325 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 C5AR2Q9P296 337 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 NCDNQ9UBB6 729 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 ZNF451Q9Y4E5 1061 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 PCDHGA10Q9Y5H3 936 aa13.02□□□□□ -0.33
CSNK1E-201ENST00000359867 A0A1W2PR48 441 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 OR5K3A6NET4 321 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 CCRL2O00421 344 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 CDX4O14627 284 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 NUDT21O43809 227 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 PCDHGA12O60330 932 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 GABARAPO95166 117 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 PVRP15151 417 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 ITGA2P17301 1181 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 CCT3P49368 545 aaKnown RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 TOP3AQ13472 1001 aaPredicted RBP13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 IL18R1Q13478 541 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 AMZ1Q400G9 498 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 CDONQ4KMG0 1287 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 ATAD3BQ5T9A4 648 aa13.01□□□□□ -0.33
CSNK1E-201ENST00000359867 FAM180BQ6P0A1 224 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms