RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 KIR2DS5A0A0G2JLQ3 304 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 A0A0G2JNG1 304 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 SLC9B1P1A6NJY1 282 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 KIR2DS3K7RE56 304 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 PROM1O43490 865 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 HS6ST1O60243 411 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 CCNKO75909 580 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 UQCRC2P22695 453 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 BLKP51451 505 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 STXBP1P61764 594 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 RHAGQ02094 409 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 EEF1A2Q05639 463 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 SLC13A2Q13183 592 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 KIR2DS5Q14953 304 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 SYPL1Q16563 259 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 PIWIL3Q7Z3Z3 882 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 TBC1D19Q8N5T2 526 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 MFSD2AQ8NA29 543 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 BAHD1Q8TBE0 780 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 XAGE5Q8WWM1 108 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 OR5P2Q8WZ92 322 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 TTC9Q92623 222 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 ASPSCR1Q9BZE9 553 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 IL1RAPQ9NPH3 570 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 DDX28Q9NUL7 540 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 RHCGQ9UBD6 479 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 TRPC4Q9UBN4 977 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 AASSQ9UDR5 926 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 ZNF639Q9UID6 485 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 ADAM29Q9UKF5 820 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 KCNE3Q9Y6H6 103 aa11.89□□□□□ -0.51
GGPS1-202ENST00000358966 ASCC3Q8N3C0 2202 aaKnown RBP11.89□□□□□ -0.51
GGPS1-202ENST00000358966 HMGN4O00479 90 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SHOXO15266 292 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SUV39H1O43463 412 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 B4GAT1O43505 415 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 MED26O95402 600 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 FABP3P05413 133 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 MATN1P21941 496 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 ALDH4A1P30038 563 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 CXCL12P48061 93 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 RGS1Q08116 209 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 NEDD8Q15843 81 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SAXO2Q658L1 398 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 ERICH5Q6P6B1 374 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 EIF3MQ7L2H7 374 aaKnown RBP11.88□□□□□ -0.51
GGPS1-202ENST00000358966 C1orf216Q8TAB5 229 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 TMEM19Q96HH6 336 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 WDR12Q9GZL7 423 aaKnown RBP11.88□□□□□ -0.51
GGPS1-202ENST00000358966 ADNPQ9H2P0 1102 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 TOR3AQ9H497 397 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 TIGARQ9NQ88 270 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 MAT2BQ9NZL9 334 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 ENPP5Q9UJA9 477 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 A0A1B0GVT2 93 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SGK494L7N484 410 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 CDC123O75794 336 aaPredicted RBP11.88□□□□□ -0.51
GGPS1-202ENST00000358966 UBXN7O94888 489 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 EPHA2P29317 976 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 FRKP42685 505 aaPredicted RBP11.88□□□□□ -0.51
GGPS1-202ENST00000358966 MAGEA2P43356 314 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 LRRC74AQ0VAA2 488 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 DAG1Q14118 895 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 VEZF1Q14119 521 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 GANABQ14697 944 aaKnown RBP11.88□□□□□ -0.51
GGPS1-202ENST00000358966 IQCCQ4KMZ1 466 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SLC48A1Q6P1K1 146 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 COMTD1Q86VU5 262 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 OOSP2Q86WS3 158 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 OR52E4Q8NGH9 312 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 GAL3ST3Q96A11 431 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 NEURL3Q96EH8 262 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SNX18Q96RF0 628 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 TMEM9Q9P0T7 183 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 CES1P1Q9UKY3 287 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 A0A0J9YY10 115 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 A0A0X1KG70 313 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 TNFSF14O43557 240 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SEMG1P04279 462 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 PCSK2P16519 638 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 PPIBP23284 216 aaKnown RBP11.88□□□□□ -0.51
GGPS1-202ENST00000358966 CENPAP49450 140 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SLC36A3Q495N2 470 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 RERGQ96A58 199 aaPredicted RBP11.88□□□□□ -0.51
GGPS1-202ENST00000358966 TM4SF19Q96DZ7 209 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 C7orf34Q96L11 122 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 MUS81Q96NY9 551 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 FAIM2Q9BWQ8 316 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 ANKRD60Q9BZ19 345 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 AMBRA1Q9C0C7 1298 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 KCNN2Q9H2S1 579 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 OR51I1Q9H343 314 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 RAD21L1Q9H4I0 556 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 NEUROD4Q9HD90 331 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 AKIP1Q9NQ31 210 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 PLSCR3Q9NRY6 295 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 CORO2BQ9UQ03 480 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 NAALAD2Q9Y3Q0 740 aa11.88□□□□□ -0.51
GGPS1-202ENST00000358966 SAMHD1Q9Y3Z3 626 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms