RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MCHR1Q99705 422 aa6.21□□□□□ -1.42
CSDE1-203ENST00000358528 GAL3ST1Q99999 423 aa6.21□□□□□ -1.42
CSDE1-203ENST00000358528 IFT27Q9BW83 186 aa6.21□□□□□ -1.42
CSDE1-203ENST00000358528 SLC46A2Q9BY10 475 aa6.21□□□□□ -1.42
CSDE1-203ENST00000358528 NEUROD4Q9HD90 331 aa6.21□□□□□ -1.42
CSDE1-203ENST00000358528 V9GYH0 126 aa6.21□□□□□ -1.42
CSDE1-203ENST00000358528 ALPK2Q86TB3 2170 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 A0A0G2JMP0 313 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 A0A0X1KG70 313 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TBC1D3BA6NDS4 549 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 FFAR1O14842 300 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CA12O43570 354 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 HMGN2P05204 90 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SYPP08247 313 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TIMP2P16035 220 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 RPS5P46782 204 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 GCGRP47871 477 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 OR3A3P47888 321 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SRP9P49458 86 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 NTHL1P78549 312 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CAP1Q01518 475 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 STX4Q12846 297 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 DSG2Q14126 1118 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 EFR3AQ14156 821 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 FCN2Q15485 313 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TRIM71Q2Q1W2 868 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 FAM71E1Q6IPT2 247 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ADGRD2Q7Z7M1 963 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SLC9B2Q86UD5 537 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 VRK2Q86Y07 508 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 OR4N5Q8IXE1 308 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CDK20Q8IZL9 346 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 KREMEN2Q8NCW0 462 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TET1Q8NFU7 2136 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 OR4M2Q8NGB6 313 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 OR51A7Q8NH64 312 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SMAP2Q8WU79 429 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 HMGB4Q8WW32 186 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 RFT1Q96AA3 541 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 RGMAQ96B86 450 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TCEAL4Q96EI5 215 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SAMD8Q96LT4 415 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM175Q9BSA9 504 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 DPH7Q9BTV6 452 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 MYNNQ9NPC7 610 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ADAP2Q9NPF8 381 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 BRD7Q9NPI1 651 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 KCNK6Q9Y257 313 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ATG2BQ96BY7 2078 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ZSWIM8A7E2V4 1837 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 OTOFQ9HC10 1997 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CHURC1-FNTBB4DL54 471 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 GABRPO00591 440 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 NDUFS4O43181 175 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 TSPAN9O75954 239 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SLCO2B1O94956 709 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SLC2A10O95528 541 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 INHAP05111 366 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 GYPBP06028 91 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ACVR2AP27037 513 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 STOMP27105 288 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ACSL1P33121 698 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 KHKP50053 298 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CCR8P51685 355 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CLDN2P57739 230 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 HYAL2Q12891 473 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ANGPT1Q15389 498 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 NDUFAF5Q5TEU4 345 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 KHDRBS2Q5VWX1 349 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SFRP4Q6FHJ7 346 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 C11orf88Q6PI97 169 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 LIPIQ6XZB0 460 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 LINGO2Q7L985 606 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CXXC5Q7LFL8 322 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 CEACAM19Q7Z692 300 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 GPR32P1Q8NGA4 272 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 GRHL3Q8TE85 626 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 IRF7Q92985 503 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 RAD9AQ99638 391 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 WFDC6Q9BQY6 131 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 PLA2G12AQ9BZM1 189 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 MKRN2Q9H000 416 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 RBFOX1Q9NWB1 397 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF780BQ9Y6R6 833 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 DICER1Q9UPY3 1922 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ARID1AO14497 2285 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 PLPP1O14494 284 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SOCS6O14544 535 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SMAD9O15198 467 aaKnown RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 PRODHO43272 600 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 HYAL3O43820 417 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 PTPN2P17706 415 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 DDCP20711 480 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 SLC9A5Q14940 896 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 MPEG1Q2M385 716 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 PLK5Q496M5 336 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF805Q5CZA5 627 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 FAM27D1Q5T7N8 215 aa6.2□□□□□ -1.42
CSDE1-203ENST00000358528 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-203ENST00000358528 OR56A3Q8NH54 315 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms