RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 BTNL2Q9UIR0 455 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 TRAPPC13A5PLN9 417 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 A8MU76 341 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 GPR37L1O60883 481 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 GRPRP30550 384 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 CPZQ66K79 652 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 ZDHHC1Q8WTX9 485 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 C16orf70Q9BSU1 422 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 RBCK1Q9BYM8 510 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 MMP28Q9H239 520 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 SPHK2Q9NRA0 654 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 POT1Q9NUX5 634 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 LATS1O95835 1130 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 PCGF2P35227 344 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 GGT2P36268 569 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 MAGEA6P43360 314 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 ZNF84P51523 738 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 CXCR4P61073 352 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 LRP8Q14114 963 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 SHFQ7M4L6 423 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 IQCF1Q8N6M8 205 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 OR6Q1Q8NGQ2 317 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 GPR150Q8NGU9 434 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 ATPIF1Q9UII2 106 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 SETD1AO15047 1707 aaKnown RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 BPIP17213 487 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 HOXD12P35452 270 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 KIAA0319Q5VV43 1072 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 IFNL1Q8IU54 200 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 OR14K1Q8NGZ2 314 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 PGAP3Q96FM1 320 aaPredicted RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 ZNF300Q96RE9 604 aaPredicted RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 STC2O76061 302 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 TFP02787 698 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 PGCP20142 388 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 TNFRSF1BP20333 461 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 METTL2BQ6P1Q9 378 aaKnown RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 SLC41A3Q96GZ6 507 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 AP1S3Q96PC3 154 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 GORASP2Q9H8Y8 452 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 UGDHO60701 494 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 RPS21P63220 83 aaKnown RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 CYCSP99999 105 aaKnown RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 SGCAQ16586 387 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 ELP2Q6IA86 826 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 PXKQ7Z7A4 578 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 OR7G2Q8NG99 324 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 ELMOD3Q96FG2 381 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 CAPNS2Q96L46 248 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 ARPC4-TTLL3A0A0A6YYG9 625 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 ZNF840PA6NDX5 716 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 ZNF850A8MQ14 1090 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 ARNTLO00327 626 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 DNAJB6O75190 326 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 CRYZL1O95825 349 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 SNAI1O95863 264 aaPredicted RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 ALDH3B2P48448 385 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 PLP2Q04941 152 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 UBE2UQ5VVX9 321 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 SLC16A9Q7RTY1 509 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 ZNF551Q7Z340 670 aaPredicted RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 SERPINA11Q86U17 422 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 OR4K13Q8NH42 304 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 LMX1AQ8TE12 382 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 PGAM5Q96HS1 289 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 SLC6A16Q9GZN6 736 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 OR51E2Q9H255 320 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 RIMS3Q9UJD0 308 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 CACNG2Q9Y698 323 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 FAM208AQ9UK61 1670 aaKnown RBP14.11□□□□□ -0.15
CHD4-201ENST00000357008 UNCXA6NJT0 531 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 SLC26A5P58743 744 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 PXYLP1Q8TE99 480 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 IGSF21Q96ID5 467 aa14.11□□□□□ -0.15
CHD4-201ENST00000357008 FEZF1A0PJY2 475 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 C1orf196B1AJZ1 125 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 GOSR2O14653 212 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 DIRAS3O95661 229 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 CAPNS1P04632 268 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 RNH1P13489 461 aaKnown RBP14.1□□□□□ -0.15
CHD4-201ENST00000357008 CAMLGP49069 296 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 SPINT3P49223 89 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 KRBOX4Q5JUW0 171 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 ZNF623O75123 536 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 ITGAMP11215 1152 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 ZER1Q7Z7L7 766 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 HOXB13Q92826 284 aaPredicted RBP14.1□□□□□ -0.15
CHD4-201ENST00000357008 RDH14Q9HBH5 336 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 ANKMY1Q9P2S6 941 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 PRSS3P35030 304 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 RNF144AP50876 292 aaPredicted RBP14.1□□□□□ -0.15
CHD4-201ENST00000357008 TMEM164Q5U3C3 297 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 SLC18B1Q6NT16 456 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 LARP4Q71RC2 724 aaKnown RBP eCLIP14.1□□□□□ -0.151e-7■■■□□ 15.8
CHD4-201ENST00000357008 C7orf61Q8IZ16 206 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 OR5AK2Q8NH90 309 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 MRI1Q9BV20 369 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 ZFP57Q9NU63 452 aa14.1□□□□□ -0.15
CHD4-201ENST00000357008 NDUFAF4Q9P032 175 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms