RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 OTOL1A6NHN0 477 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 SYT7O43581 403 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 LILRB3O75022 631 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 GLSO94925 669 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 PAK4O96013 591 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 PYCR1P32322 319 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 FNTBP49356 437 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 CSNK2A1P68400 391 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 HHEXQ03014 270 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 NPRL3Q12980 569 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SNTB2Q13425 540 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 RUNX3Q13761 415 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 LRRC37A5PQ49AS3 106 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 MSS51Q4VC12 460 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 FIGLAQ6QHK4 219 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 RTL10Q7L3V2 364 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 TRIM74Q86UV6 250 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 COMTD1Q86VU5 262 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 KLBQ86Z14 1044 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 BOLLQ8N9W6 283 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 OR51A7Q8NH64 312 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 CPT1CQ8TCG5 803 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 ECHDC3Q96DC8 303 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 MSI2Q96DH6 328 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 L3HYPDHQ96EM0 354 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 C7orf34Q96L11 122 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 TTTY10Q9BZA0 68 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 PPP1R14DQ9NXH3 145 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 ERVK-19Q9WJR5 959 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 LOC102725191A0A1B0GVB3 256 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 ANKRD30BLA7E2S9 258 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 ANHXE9PGG2 379 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SDHDO14521 159 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SEMA4FO95754 770 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 PENKP01210 267 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 GGT1P19440 569 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 ELK4P28324 431 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 MSX1P28360 303 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 MTNR1AP48039 350 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 LSSP48449 732 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 MCCD1P59942 119 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 CAMK2DQ13557 499 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 DOC2AQ14183 400 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 NR0B2Q15466 257 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 UNC50Q53HI1 259 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SFT2D3Q587I9 215 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 GPR157Q5UAW9 335 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 C14orf80Q86SX3 495 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 DCP2Q8IU60 420 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 PDZD9Q8IXQ8 264 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SLC35F2Q8IXU6 374 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 KRTCAP2Q8N6L1 136 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 ASCC1Q8N9N2 400 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 OR52E2Q8NGJ4 325 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SFXN5Q8TD22 340 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 FBXL8Q96CD0 374 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 TXNDC15Q96J42 360 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 RADILQ96JH8 1075 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 MSLNLQ96KJ4 702 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 OR14A2Q96R54 314 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 PEBP4Q96S96 227 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 ZFYVE21Q9BQ24 234 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 TSPAN10Q9H1Z9 355 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 C19orf12Q9NSK7 152 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SACM1LQ9NTJ5 587 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 REV1Q9UBZ9 1251 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SETD1AO15047 1707 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 MDFIC2A0A1B0GVS7 189 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 A0A1W2PPW3 197 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 FOXE1O00358 373 aaPredicted RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 CNOT4O95628 575 aaKnown RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 PTHP01270 115 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 CSF1P09603 554 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 OR8U9P0C7N5 309 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 THEGLP0DJG4 465 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 ZNF28P17035 718 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 DSC1Q08554 894 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 GALNT1Q10472 559 aaPredicted RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 APOFQ13790 326 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 CCDC58Q4VC31 144 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 BLOC1S3Q6QNY0 202 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 TTLL10Q6ZVT0 673 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 ZC3H3Q8IXZ2 948 aaKnown RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 ZNF619Q8N2I2 560 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 CNIH3Q8TBE1 160 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 LRR1Q96L50 414 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 MUS81Q96NY9 551 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 MGLLQ99685 303 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 PRDM4Q9UKN5 801 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 SRPK3Q9UPE1 567 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 TIMM8BQ9Y5J9 83 aaPredicted RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 SPO11Q9Y5K1 396 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 IRS2Q9Y4H2 1338 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 LMO7Q8WWI1 1683 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 ZNF840PA6NDX5 716 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 IGLON5A6NGN9 336 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 KIAA0513O60268 411 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 NDUFB2O95178 105 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms