RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 OR2A12Q8NGT7 310 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 BBS10Q8TAM1 723 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 LRRC20Q8TCA0 184 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 KAT2AQ92830 837 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 DHRS9Q9BPW9 319 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 MARVELD1Q9BSK0 173 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 NIPAL2Q9H841 368 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 MED20Q9H944 212 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 CDH10Q9Y6N8 788 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 ANAPC1Q9H1A4 1944 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 A0A087WUU8 490 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 A0A0B4J203 849 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 SOCS6O14544 535 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 PDPK1O15530 556 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 HCN1O60741 890 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 NAT1P18440 290 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 SLC1A3P43003 542 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 NXPE4Q6UWF7 544 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 ESPNLQ6ZVH7 1005 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 IFNL1Q8IU54 200 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 NPAS4Q8IUM7 802 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 DUSP18Q8NEJ0 188 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 FIBINQ8TAL6 211 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 TEFMQ96QE5 360 aaKnown RBP9.55□□□□□ -0.88
PTPRA-203ENST00000356147 SECISBP2Q96T21 854 aaKnown RBP9.55□□□□□ -0.88
PTPRA-203ENST00000356147 MED28Q9H204 178 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 NKIRAS2Q9NYR9 191 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 PTGFRNQ9P2B2 879 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 NCKAP1Q9Y2A7 1128 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 PCYT1BQ9Y5K3 369 aaPredicted RBP9.55□□□□□ -0.88
PTPRA-203ENST00000356147 KCNE3Q9Y6H6 103 aa9.55□□□□□ -0.88
PTPRA-203ENST00000356147 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 TEX46H3BTG2 121 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 SEC14L5O43304 696 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 CHP2O43745 196 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ERAL1O75616 437 aaKnown RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 TBX6O95947 436 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 EIF4EP06730 217 aaKnown RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 CD3GP09693 182 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ACP2P11117 423 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF30P17039 623 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 FUT1P19526 365 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 TBXA2RP21731 343 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 GABRA5P31644 462 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 RECQLP46063 649 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 TPBGQ13641 420 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 LASP1Q14847 261 aaKnown RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 SMARCD3Q6STE5 483 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 CREB3L2Q70SY1 520 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 SAMD12Q8N8I0 201 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 OR51G2Q8NGK0 314 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 TEX47Q8TBZ9 253 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 DOK4Q8TEW6 326 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 OVCA2Q8WZ82 227 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 SMPDL3AQ92484 453 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 GLYATL1Q969I3 302 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 NEURL3Q96EH8 262 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 FCRL4Q96PJ5 515 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 GTPBP2Q9BX10 602 aaKnown RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 SIRT3Q9NTG7 399 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ZCCHC3Q9NUD5 404 aaKnown RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 GLTPQ9NZD2 209 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 MRPL15Q9P015 296 aaKnown RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 NDOR1Q9UHB4 597 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 TAC3Q9UHF0 121 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 GPR55Q9Y2T6 319 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 SIRT4Q9Y6E7 314 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ARRDC5A6NEK1 342 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 FAM170BA6NMN3 283 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 PRODHO43272 600 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 TMPRSS11DO60235 418 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 HRGP04196 525 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 CTSAP10619 480 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 SHC1P29353 583 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 PKLRP30613 574 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF155Q12901 538 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 RPA4Q13156 261 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 PIP5KL1Q5T9C9 394 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.54□□□□□ -0.887e-7■■■■□ 22.4
PTPRA-203ENST00000356147 ADCK2Q7Z695 626 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 SLC9B2Q86UD5 537 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 GPR135Q8IZ08 494 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ZNF655Q8N720 491 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 OR5AR1Q8NGP9 310 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ANGPTL6Q8NI99 470 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 TM4SF18Q96CE8 201 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 CXorf40BQ96DE9 158 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 C16orf58Q96GQ5 468 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ZFP3Q96NJ6 502 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ARHGAP9Q9BRR9 750 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 DDX31Q9H8H2 851 aaKnown RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 KLHL1Q9NR64 748 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 ENAMQ9NRM1 1142 aa9.54□□□□□ -0.88
PTPRA-203ENST00000356147 IMP3Q9NV31 184 aaKnown RBP9.54□□□□□ -0.88
PTPRA-203ENST00000356147 H7BY64 318 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 ALDH1A1P00352 501 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 DRD5P21918 477 aa9.53□□□□□ -0.88
PTPRA-203ENST00000356147 TRIM23P36406 574 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms