RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 NPR2P20594 1047 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 KELP23276 732 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 ITPKBP27987 946 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 S100A2P29034 98 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 SLC6A11P48066 632 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 FXYD6P3P58550 94 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 WDR53Q7Z5U6 358 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-202ENST00000355815 CEACAM19Q7Z692 300 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 NATD1Q8N6N6 113 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 MUL1Q969V5 352 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 DNAJA3Q96EY1 480 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 DOHHQ9BU89 302 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
SREBF1-202ENST00000355815 PHPT1Q9NRX4 125 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-202ENST00000355815 NDOR1Q9UHB4 597 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 MGAT4BQ9UQ53 548 aa13.35□□□□□ -0.27
SREBF1-202ENST00000355815 A0A1W2PP55 124 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 OR12D1P0DN82 309 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 IL32P24001 234 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 GNALP38405 381 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 NRIP1P48552 1158 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 LRRC32Q14392 662 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 FAM76BQ5HYJ3 339 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF311Q5JNZ3 666 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ALKAL2Q6UX46 152 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 IL20RBQ6UXL0 311 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF480Q8WV37 535 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 LCN9Q8WX39 176 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 CARS2Q9HA77 564 aaKnown RBP13.34□□□□□ -0.27
SREBF1-202ENST00000355815 FRS3O43559 492 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 RFPL3O75679 317 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 VNN2O95498 520 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 PDGFAP04085 211 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 TIMP2P16035 220 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 F8A1P23610 371 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 LIPAP38571 399 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 HBA1P69905 142 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 NKG7Q16617 165 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 FAM46CQ5VWP2 391 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 LIPJQ5W064 366 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF676Q8N7Q3 588 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 GRHL3Q8TE85 626 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ZNF354BQ96LW1 612 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 FOLH1BQ9HBA9 442 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 QPCTLQ9NXS2 382 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 PPT2Q9UMR5 302 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ELOA3DA6NLF2 546 aaPredicted RBP13.34□□□□□ -0.27
SREBF1-202ENST00000355815 OR52A4PA6NMU1 304 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 NDUFS4O43181 175 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ARHGEF15O94989 841 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 RAB36O95755 333 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 CD9P21926 228 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 IDSP22304 550 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 CDK10Q15131 360 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ELOA3BQ3SY89 546 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 TMEM179BQ7Z7N9 219 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 OR4N5Q8IXE1 308 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 ELOA3Q8NG57 546 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 DNAJA4Q8WW22 397 aaPredicted RBP13.34□□□□□ -0.27
SREBF1-202ENST00000355815 LMLNQ96KR4 655 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 AMBRA1Q9C0C7 1298 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 GALNT9Q9HCQ5 603 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 STUB1Q9UNE7 303 aa13.34□□□□□ -0.27
SREBF1-202ENST00000355815 A0A1B0GVT2 93 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 K7ESM1 405 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 SEC14L2O76054 403 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 PTHP01270 115 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 HOXC8P31273 242 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 CSNK1DP48730 415 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 WDR5P61964 334 aaKnown RBP13.33□□□□□ -0.27
SREBF1-202ENST00000355815 LIPIQ6XZB0 460 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 GALNT13Q8IUC8 556 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 GSKIPQ9P0R6 139 aa13.33□□□□□ -0.27
SREBF1-202ENST00000355815 HPGDSO60760 199 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 GDI1P31150 447 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 SLAMF1Q13291 335 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 RGNQ15493 299 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 PARS2Q7L3T8 475 aaKnown RBP13.33□□□□□ -0.28
SREBF1-202ENST00000355815 MMP21Q8N119 569 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.33□□□□□ -0.281e-323■■■■■ 89.8
SREBF1-202ENST00000355815 BADQ92934 168 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 RIPOR3Q96MK2 946 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 SAP130Q9H0E3 1048 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 WDR26Q9H7D7 661 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 FKBP14Q9NWM8 211 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 FABP7O15540 132 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 CYP17A1P05093 508 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 TLX1P31314 330 aaPredicted RBP13.33□□□□□ -0.28
SREBF1-202ENST00000355815 ACTR1BP42025 376 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 ACTR1AP61163 376 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 AQP6Q13520 282 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 SPRED1Q7Z699 444 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 SERPINA12Q8IW75 414 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 PDZD9Q8IXQ8 264 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 GAL3ST3Q96A11 431 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 OR4K3Q96R72 315 aa13.33□□□□□ -0.28
SREBF1-202ENST00000355815 SNX18Q96RF0 628 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms