RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 WASP42768 502 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SCAPQ12770 1279 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF283Q8N7M2 679 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR5AK2Q8NH90 309 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 TMEM19Q96HH6 336 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 XYLT2Q9H1B5 865 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 RHPN2P1A8MT19 583 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SOX1O00570 391 aaPredicted RBP12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF8P17098 575 aaPredicted RBP12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 PTPN2P17706 415 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 GABRB3P28472 473 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 CPOXP36551 454 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 RRAS2P62070 204 aaPredicted RBP12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLAMF1Q13291 335 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SUSD1Q6UWL2 747 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR56B4Q8NH76 319 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ADAMTS14Q8WXS8 1223 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SMPDL3BQ92485 455 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM46AQ96IP4 442 aaKnown RBP12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC38A1Q9H2H9 487 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 NOX3Q9HBY0 568 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 MYH10P35580 1976 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ANKRD33BA6NCL7 494 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 PPA1Q15181 289 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 UNC5DQ6UXZ4 953 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 LARP4Q71RC2 724 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■□□□ 13.8
SYNCRIP-201ENST00000355238 SHFQ7M4L6 423 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 CLECL1Q8IZS7 167 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 DPYSL5Q9BPU6 564 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 CACNG4Q9UBN1 327 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 NAALAD2Q9Y3Q0 740 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 UGT2A1Q9Y4X1 527 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF850A8MQ14 1090 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SULT1B1O43704 296 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 MAFKO60675 156 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ALPLP05186 524 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 TRAPPC2P0DI81 140 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 TRAPPC2BP0DI82 140 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 TYRP14679 529 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SMPD1P17405 629 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 PTNP21246 168 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ACTR1BP42025 376 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ACTR1AP61163 376 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 PTPRRQ15256 657 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM110CQ1W6H9 321 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR6N1Q8NGY5 312 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 CA5BQ9Y2D0 317 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 GPR52Q9Y2T5 361 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 HEMK1Q9Y5R4 338 aaPredicted RBP12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 C1orf226A1L170 272 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM72CH0Y354 149 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 MUSKO15146 869 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 FUCA1P04066 466 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 DDOSTP39656 456 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 BLKP51451 505 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 TLE3Q04726 772 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 MGAT3Q09327 533 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 OPCMLQ14982 345 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM72AQ5TYM5 149 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM72DQ6L9T8 149 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ENPP7Q6UWV6 458 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM72BQ86X60 149 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 IQCF1Q8N6M8 205 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 PAQR8Q8TEZ7 354 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 NINJ1Q92982 152 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 ECHDC3Q96DC8 303 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 C12orf42Q96LP6 360 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 SAMD11Q96NU1 681 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 HERPUD2Q9BSE4 406 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 MINDY3Q9H8M7 445 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 RBFOX1Q9NWB1 397 aaKnown RBP12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 BTNL2Q9UIR0 455 aa12.1□□□□□ -0.47
SYNCRIP-201ENST00000355238 OR6C6A6NF89 314 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 CTDSP2O14595 271 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 TPMTP51580 245 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAPQ12884 760 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 MFSD13AQ14CX5 517 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 BCL2A1Q16548 175 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC35G1Q2M3R5 365 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 TMEM102Q8N9M5 508 aaPredicted RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 BORCS8Q96FH0 119 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF419Q96HQ0 510 aaPredicted RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 PRDM9Q9NQV7 894 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 OLAHQ9NV23 265 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ASB6Q9NWX5 421 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 B3GNT2Q9NY97 397 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 UBE2J1Q9Y385 318 aaPredicted RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ATP6V1G2-DDX39BF2Z307 99 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC31A1O15431 190 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 DUSP11O75319 330 aaKnown RBP12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 DOC2AQ14183 400 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 HMGN3Q15651 99 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 FAM205BPQ63HN1 556 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 GALNT10Q86SR1 603 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 RASGRP3Q8IV61 690 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SUMF2Q8NBJ7 301 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 ZNF559Q9BR84 538 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 SLC28A3Q9HAS3 691 aa12.09□□□□□ -0.47
SYNCRIP-201ENST00000355238 GKN1Q9NS71 199 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms