RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 FAM227AF5H4B4 570 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 I3L1I5 382 aaPredicted RBP16.08■□□□□ 0.16
VPS13B-201ENST00000355155 PCDHGA12O60330 932 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 MRPS14O60783 128 aaKnown RBP16.08■□□□□ 0.16
VPS13B-201ENST00000355155 ONECUT2O95948 504 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 TNFRSF1BP20333 461 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 SPIBQ01892 262 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 FOXB2Q5VYV0 432 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 TYW3Q6IPR3 259 aaKnown RBP16.08■□□□□ 0.16
VPS13B-201ENST00000355155 LAIR2Q6ISS4 152 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 TSPYL5Q86VY4 417 aaPredicted RBP16.08■□□□□ 0.16
VPS13B-201ENST00000355155 SCN3AQ9NY46 2000 aa16.08■□□□□ 0.16
VPS13B-201ENST00000355155 TGFBR3LH3BV60 316 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 PRKAG1P54619 331 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 NUP107P57740 925 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 SERTAD2Q14140 314 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 EXOC3L2Q2M3D2 409 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 TRMT12Q53H54 448 aaKnown RBP16.07■□□□□ 0.16
VPS13B-201ENST00000355155 NKAIN2Q5VXU1 208 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 TMEM71Q6P5X7 295 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 COMTD1Q86VU5 262 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 AHCYL2Q96HN2 611 aaKnown RBP16.07■□□□□ 0.16
VPS13B-201ENST00000355155 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 SPRTNQ9H040 489 aaPredicted RBP16.07■□□□□ 0.16
VPS13B-201ENST00000355155 TRIM45Q9H8W5 580 aaPredicted RBP16.07■□□□□ 0.16
VPS13B-201ENST00000355155 KRT84Q9NSB2 600 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 SLC9A8Q9Y2E8 581 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 CHST2Q9Y4C5 530 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 TESMINQ9Y4I5 508 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 FAAHO00519 579 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 LDB3O75112 727 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 GADD45GO95257 159 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 ALPPP05187 535 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 CCDC159P0C7I6 412 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 FUT7Q11130 342 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 DUSP5Q16690 384 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 ZIK1Q3SY52 487 aaPredicted RBP16.07■□□□□ 0.16
VPS13B-201ENST00000355155 OR4N5Q8IXE1 308 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 SLC16A11Q8NCK7 471 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 SLC35B4Q969S0 331 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 PRRC1Q96M27 445 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 SDF2Q99470 211 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 SOX17Q9H6I2 414 aaPredicted RBP16.07■□□□□ 0.16
VPS13B-201ENST00000355155 LANCL2Q9NS86 450 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 PCDHGA8Q9Y5G5 932 aa16.07■□□□□ 0.16
VPS13B-201ENST00000355155 EME2A4GXA9 379 aaPredicted RBP16.06■□□□□ 0.16
VPS13B-201ENST00000355155 BCKDKO14874 412 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 KIAA0513O60268 411 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 CCNB2O95067 398 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 ALOX5P09917 674 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 CT62P0C5K7 136 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 NPRL3Q12980 569 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 NPTX1Q15818 432 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 MLIPQ5VWP3 458 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 SLC23A3Q6PIS1 610 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 RBM38Q9H0Z9 239 aaKnown RBP16.06■□□□□ 0.16
VPS13B-201ENST00000355155 CUTCQ9NTM9 273 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 NDOR1Q9UHB4 597 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 SH3GLB1Q9Y371 365 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 SPAG17Q6Q759 2223 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 J3KTA2 159 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 JUNBP17275 347 aaPredicted RBP16.06■□□□□ 0.16
VPS13B-201ENST00000355155 CHRNEQ04844 493 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 CSTF1Q05048 431 aaKnown RBP16.06■□□□□ 0.16
VPS13B-201ENST00000355155 PPP1R8Q12972 351 aaKnown RBP16.06■□□□□ 0.16
VPS13B-201ENST00000355155 RNF220Q5VTB9 566 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 OFCC1Q8IZS5 231 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 DTWD2Q8NBA8 298 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 CCDC74AQ96AQ1 378 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 PRTFDC1Q9NRG1 225 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 PAPOLBQ9NRJ5 636 aaKnown RBP16.06■□□□□ 0.16
VPS13B-201ENST00000355155 SOHLH2Q9NX45 425 aa16.06■□□□□ 0.16
VPS13B-201ENST00000355155 IGKV3D-11A0A0A0MRZ8 115 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 CLDN4O14493 209 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 DSCR3O14972 297 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 MITFO75030 526 aaPredicted RBP16.05■□□□□ 0.16
VPS13B-201ENST00000355155 ADAP00813 363 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 ELAVL4P26378 380 aaKnown RBP16.05■□□□□ 0.16
VPS13B-201ENST00000355155 PDX1P52945 283 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 CDH12P55289 794 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 EEF1A1P68104 462 aaKnown RBP16.05■□□□□ 0.16
VPS13B-201ENST00000355155 GPAT3Q53EU6 434 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 C6orf141Q5SZD1 244 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 QSOX2Q6ZRP7 698 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 LACC1Q8IV20 430 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 ALDH16A1Q8IZ83 802 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 SHISA5Q8N114 240 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 VWA5B2Q8N398 1253 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 SLC5A8Q8N695 610 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 TOR1AIP2Q8NFQ8 470 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 CDS1Q92903 461 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 ZNF501Q96CX3 271 aaPredicted RBP16.05■□□□□ 0.16
VPS13B-201ENST00000355155 CNDP2Q96KP4 475 aaKnown RBP16.05■□□□□ 0.16
VPS13B-201ENST00000355155 NMNAT1Q9HAN9 279 aaPredicted RBP16.05■□□□□ 0.16
VPS13B-201ENST00000355155 CDC14AQ9UNH5 594 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 MGAT4BQ9UQ53 548 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 TMEM184BQ9Y519 407 aaPredicted RBP16.05■□□□□ 0.16
VPS13B-201ENST00000355155 EIF4E1BA6NMX2 242 aaKnown RBP16.05■□□□□ 0.16
VPS13B-201ENST00000355155 NT5EP21589 574 aa16.05■□□□□ 0.16
VPS13B-201ENST00000355155 CRHBPP24387 322 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms