RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 MIXL1Q9H2W2 232 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 ANKRA2Q9H9E1 313 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 NANSQ9NR45 359 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 SLC22A11Q9NSA0 550 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 HCFC2Q9Y5Z7 792 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 WNT6Q9Y6F9 365 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 SCN8AQ9UQD0 1980 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 KNL1Q8NG31 2342 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 ADRA2AP08913 450 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 MPC1LP0DKB6 136 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ACRP10323 421 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ANXA3P12429 323 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 RAB3BP20337 219 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 IDSP22304 550 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 CHI3L1P36222 383 aaPredicted RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 ATP12AP54707 1039 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 HSF2Q03933 536 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 PPIGQ13427 754 aaKnown RBP eCLIP8.86□□□□□ -0.993e-6■■□□□ 13.5
SMG6-202ENST00000354901 SLBPQ14493 270 aaKnown RBP eCLIP8.86□□□□□ -0.99
SMG6-202ENST00000354901 EXOC3L2Q2M3D2 409 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 FBXO43Q4G163 708 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ZNF697Q5TEC3 545 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TMEM215Q68D42 235 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ZNF613Q6PF04 617 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TRMT11Q7Z4G4 463 aaKnown RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 DDX53Q86TM3 631 aaKnown RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 CACUL1Q86Y37 369 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 LGI4Q8N135 537 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 OR8J2Q8NGG1 315 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 WDR48Q8TAF3 677 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 UFD1Q92890 307 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ZSWIM3Q96MP5 696 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 IL17FQ96PD4 163 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 GSX2Q9BZM3 304 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TMEM245Q9H330 911 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ZDHHC4Q9NPG8 344 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TBX21Q9UL17 535 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ACSL5Q9ULC5 683 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 PLAGL1Q9UM63 463 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TRAPPC4Q9Y296 219 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 PDCD5O14737 125 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ADAMDEC1O15204 470 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 GCM2O75603 506 aaPredicted RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 SOX14O95416 240 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TPOP07202 933 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 MAOBP27338 520 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ETV6P41212 452 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TMEM115Q12893 351 aaPredicted RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 ETFDHQ16134 617 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ZNF704Q6ZNC4 412 aaPredicted RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 SZRD1Q7Z422 152 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 KIAA0907Q7Z7F0 614 aaPredicted RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 ADGRG3Q86Y34 549 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 SYNPOQ8N3V7 929 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ATOH1Q92858 354 aaPredicted RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 OTUB1Q96FW1 271 aaPredicted RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 DOHHQ9BU89 302 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 BCL2L14Q9BZR8 327 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 C3orf14Q9HBI5 128 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 B3GAT2Q9NPZ5 323 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 NDUFAF4Q9P032 175 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 PFDN2Q9UHV9 154 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 PCDHGB3Q9Y5G1 929 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 CHD7Q9P2D1 2997 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 CHP2O43745 196 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 PIP5K1CO60331 668 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 EGFP01133 1207 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ELFN1P0C7U0 828 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 IL1RNP18510 177 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ACADLP28330 430 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TBPL1P62380 186 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 NTHL1P78549 312 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TEAD2Q15562 447 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 AKIRIN2Q53H80 203 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 MPP7Q5T2T1 576 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 SLC6A19Q695T7 634 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TIGD3Q6B0B8 471 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 RNF165Q6ZSG1 346 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 TSEN54Q7Z6J9 526 aaKnown RBP8.86□□□□□ -0.99
SMG6-202ENST00000354901 GPALPP1Q8IXQ4 340 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 ING5Q8WYH8 240 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 PTP4A1Q93096 173 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 SAP130Q9H0E3 1048 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 GPATCH2Q9NW75 528 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 PLXNB3Q9ULL4 1909 aa8.86□□□□□ -0.99
SMG6-202ENST00000354901 RTCAO00442 366 aaKnown RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 KLK1P06870 262 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 DRD5P21918 477 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ALDH9A1P49189 494 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 TAS2R50P59544 299 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 SP140Q13342 867 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 SCARB2Q14108 478 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 CRTC2Q53ET0 693 aaPredicted RBP8.85□□□□□ -0.99
SMG6-202ENST00000354901 IL20RBQ6UXL0 311 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 BTN2A1Q7KYR7 527 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 COMMD6Q7Z4G1 85 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 CPXM2Q8N436 756 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 OR11H7Q8NGC8 314 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 FBLIM1Q8WUP2 373 aa8.85□□□□□ -0.99
SMG6-202ENST00000354901 ZNF480Q8WV37 535 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms