RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 ZNF778Q96MU6 729 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 DCLRE1CQ96SD1 692 aaKnown RBP12.04□□□□□ -0.48
COL6A3-203ENST00000353578 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
COL6A3-203ENST00000353578 GPR83Q9NYM4 423 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 PIP5K1CO60331 668 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 SH3BGRLO75368 114 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 CDK14O94921 469 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 NDUFV2P19404 249 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 KCNQ1P51787 676 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 CLCN3P51790 818 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 SYT6Q5T7P8 510 aaPredicted RBP12.04□□□□□ -0.48
COL6A3-203ENST00000353578 CHST9Q7L1S5 443 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 ZMIZ2Q8NF64 920 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 UHRF1Q96T88 793 aaPredicted RBP12.04□□□□□ -0.48
COL6A3-203ENST00000353578 NUPL2O15504 423 aaKnown RBP12.04□□□□□ -0.48
COL6A3-203ENST00000353578 RAP1AP62834 184 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 GRIK4Q16099 956 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 GPR157Q5UAW9 335 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 NRARPQ7Z6K4 114 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 TMEM150AQ86TG1 271 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 LSMEM1Q8N8F7 131 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 ACP6Q9NPH0 428 aa12.04□□□□□ -0.48
COL6A3-203ENST00000353578 JTBO76095 146 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 DHRS4L1P0CG22 281 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SUMO1P63165 101 aaKnown RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 OR1J1Q8NGS3 322 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 GIMAP1Q8WWP7 306 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 COPS3Q9UNS2 423 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 HYKKA2RU49 373 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 RGS13O14921 159 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 CXCR1P25024 350 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 STC1P52823 247 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 ADGRF1Q5T601 910 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 VASH1Q7L8A9 365 aaPredicted RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 C14orf79Q96F83 325 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 PWWP2AQ96N64 755 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 EBPLQ9BY08 206 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 METTL17Q9H7H0 456 aaPredicted RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 OR6C75A6NL08 312 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 ZNF726A6NNF4 738 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 ARPC1BO15143 372 aaKnown RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 EFNA1P20827 205 aaPredicted RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 GUK1Q16774 197 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 NOL9Q5SY16 702 aaKnown RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SALL4Q9UJQ4 1053 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 K7EPK0 472 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 OR2C1O95371 312 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 P2RX3P56373 397 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 TCTE1Q5JU00 501 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 C6orf136Q5SQH8 315 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 TMEM151AQ8N4L1 468 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 FAM71E2Q8N5Q1 922 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 NFKBIDQ8NI38 313 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 IL12RB2Q99665 862 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 YTHDF2Q9Y5A9 579 aaKnown RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 AGRPO00253 132 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 GRM6O15303 877 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SPATA31D3P0C874 917 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 MICAQ29983 383 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 HENMT1Q5T8I9 393 aaKnown RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SPATA31D4Q6ZUB0 917 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SLIT2O94813 1529 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 H3BRB1 525 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 UFM1P61960 85 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 IRF9Q00978 393 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 TAF9Q16594 264 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 GLYATL2Q8WU03 294 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 P2RY13Q9BPV8 354 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 TUT1Q9H6E5 874 aaKnown RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 IL37Q9NZH6 218 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 OR6C2Q9NZP2 312 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SLC17A6Q9P2U8 582 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 CACNG3O60359 315 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 MAFO75444 373 aaPredicted RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 STK17BO94768 372 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SCG5P05408 212 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 G6PDP11413 515 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 C5AR1P21730 350 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 CHRNA4P43681 627 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SERINC3Q13530 473 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 KIAA0141Q14154 515 aaPredicted RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 TMEM183BQ1AE95 376 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 LYSMD2Q8IV50 215 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 OR7D4Q8NG98 312 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 APH1BQ8WW43 257 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SUSD6Q92537 303 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 RBMXL1Q96E39 390 aaKnown RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 PKMYT1Q99640 499 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 SDHAF3Q9NRP4 125 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 C1GALT1Q9NS00 363 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 ZNF223Q9UK11 482 aaPredicted RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 FZD10Q9ULW2 581 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 STRAPQ9Y3F4 350 aaKnown RBP12.03□□□□□ -0.48
COL6A3-203ENST00000353578 GPR89AB7ZAQ6 455 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 GPR89BP0CG08 455 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 TEKQ02763 1124 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 ZNF678Q5SXM1 525 aa12.03□□□□□ -0.48
COL6A3-203ENST00000353578 ADGRF3Q8IZF5 1079 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms