RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 WRAP53Q9BUR4 548 aaKnown RBP7.21□□□□□ -1.25
BRCA1-201ENST00000352993 SHARPINQ9H0F6 387 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 ARL6Q9H0F7 186 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 FXYD6Q9H0Q3 95 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 EGLN3Q9H6Z9 239 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 MVB12BQ9H7P6 319 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 RDH14Q9HBH5 336 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 FZD3Q9NPG1 666 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 SPATA6Q9NWH7 488 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-201ENST00000352993 KIF25Q9UIL4 384 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 PCDHGA9Q9Y5G4 932 aaKnown RBP7.21□□□□□ -1.25
BRCA1-201ENST00000352993 MEIKINA0A087WXM9 373 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 C17orf102A2RUQ5 167 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 C7orf66A4D0T2 115 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 A8MVJ9 347 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 HPXP02790 462 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 ACP2P11117 423 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 SHC1P29353 583 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 CCR7P32248 378 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 HMGA2P52926 109 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 TAP2Q03519 686 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 PUM1Q14671 1186 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 C12orf73Q69YU5 71 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 RETSATQ6NUM9 610 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 ATRAIDQ6UW56 229 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 TMPRSS11BQ86T26 416 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 BOLLQ8N9W6 283 aaKnown RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 OR4K5Q8NGD3 323 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 OR5M3Q8NGP4 307 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 TRMT10AQ8TBZ6 339 aaKnown RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 SLC7A13Q8TCU3 470 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 ADAMTS14Q8WXS8 1223 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 NPAS1Q99742 590 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 GSDMCQ9BYG8 508 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 CHST8Q9H2A9 424 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 TRPC4Q9UBN4 977 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 IL20RAQ9UHF4 553 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 POMT2Q9UKY4 750 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 PLCL2Q9UPR0 1127 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 TP53BP1Q12888 1972 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 DOCK4Q8N1I0 1966 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 NUMA1Q14980 2115 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 KCNE1BA0A087WTH5 132 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 M0R3H8 397 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 CHST10O43529 356 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 SLC28A2O43868 658 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 SNAI1O95863 264 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 OR12D1P0DN82 309 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 PTBP1P26599 531 aaKnown RBP eCLIP7.21□□□□□ -1.261e-7■■■■■ 45.2
BRCA1-201ENST00000352993 SLC1A3P43003 542 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 PSEN2P49810 448 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 MVDP53602 400 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 OR10A3P58181 314 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 TAS2R50P59544 299 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 PSMA6P60900 246 aaKnown RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 LSM11P83369 360 aaKnown RBP eCLIP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 DGCR2P98153 550 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 OC90Q02509 493 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 SLC3A1Q07837 685 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 FAM27D1Q5T7N8 215 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 PODNL1Q6PEZ8 512 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 ESPNLQ6ZVH7 1005 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 PRSS45Q7RTY3 260 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 THOC6Q86W42 341 aaKnown RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 FAM26EQ8N5C1 309 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 L3MBTL4Q8NA19 623 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 PLA2G15Q8NCC3 412 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 CLRN3Q8NCR9 226 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 SOSTQ9BQB4 213 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 POLDIP3Q9BY77 421 aaKnown RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 OR51B5Q9H339 312 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF768Q9H5H4 540 aaKnown RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 REEP4Q9H6H4 257 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 LDAHQ9H6V9 325 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 C1GALT1Q9NS00 363 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 TEX10Q9NXF1 929 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 KCMF1Q9P0J7 381 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 CYB5R1Q9UHQ9 305 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 FBXW2Q9UKT8 454 aa7.21□□□□□ -1.26
BRCA1-201ENST00000352993 SF3B6Q9Y3B4 125 aaKnown RBP7.21□□□□□ -1.26
BRCA1-201ENST00000352993 RALGAPA2Q2PPJ7 1873 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 IRGMA1A4Y4 181 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 H7C0S8 307 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 RNASET2O00584 256 aaKnown RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 PRODHO43272 600 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 FZD7O75084 574 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 RP2O75695 350 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 LDOC1O95751 146 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TFPIP10646 304 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 FGF9P31371 208 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 OR1G1P47890 313 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 RAB40BQ12829 278 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 DUSP4Q13115 394 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ETFDHQ16134 617 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 GSG1Q2KHT4 349 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 ZXDCQ2QGD7 858 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TMEM201Q5SNT2 666 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 TCTN3Q6NUS6 607 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 CDC73Q6P1J9 531 aa7.2□□□□□ -1.26
BRCA1-201ENST00000352993 VRK3Q8IV63 474 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms