RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 RUBCNLQ9H714 662 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 CXorf36Q9H7Y0 433 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 UCK1Q9HA47 277 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 GPATCH2Q9NW75 528 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 ADPRHL2Q9NX46 363 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 TAS2R9Q9NYW1 312 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 MAP4K5Q9Y4K4 846 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 KLK4Q9Y5K2 254 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 CSNK1G3Q9Y6M4 447 aa12.6□□□□□ -0.39
UBA3-201ENST00000349511 TMEM229AB2RXF0 380 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SGK494L7N484 410 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 PROM1O43490 865 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SMIM10L1P0DMW3 83 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 ALOX12P18054 663 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 AVPR2P30518 371 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 LIPAP38571 399 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 CRATP43155 626 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 GSSP48637 474 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 EIF2B2P49770 351 aaKnown RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 CSNK2BP67870 215 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 DUSP2Q05923 314 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 TGM3Q08188 693 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 RGNQ15493 299 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SYT16Q17RD7 645 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 PLEKHG7Q6ZR37 379 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 ABHD13Q7L211 337 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 TSEN54Q7Z6J9 526 aaKnown RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 C11orf74Q86VG3 221 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 P3H2Q8IVL5 708 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 OR4N5Q8IXE1 308 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 CCDC116Q8IYX3 515 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SAP25Q8TEE9 199 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SLC38A4Q969I6 547 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 ZHX1-C8orf76Q96EF9 292 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SMIM10Q96HG1 83 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 ZC3H10Q96K80 434 aaKnown RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 COPS4Q9BT78 406 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 FAIM2Q9BWQ8 316 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SPATA9Q9BWV2 254 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 DSN1Q9H410 356 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 ZNF282Q9UDV7 671 aaPredicted RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 FBXO4Q9UKT5 387 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 ZNF451Q9Y4E5 1061 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 PCDHGB3Q9Y5G1 929 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 URADA6NGE7 173 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 M0R082 166 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SIGLEC6O43699 453 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 GCM2O75603 506 aaPredicted RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 ETFAP13804 333 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 CHI3L1P36222 383 aaPredicted RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 MLLT3P42568 568 aaPredicted RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 PCBP4P57723 403 aaKnown RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 RPS26P62854 115 aaKnown RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 TRA2BP62995 288 aaKnown RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 AGAP7PQ5VUJ5 663 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 TCEAL6Q6IPX3 200 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 GUSBP11Q6P575 273 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 NCCRP1Q6ZVX7 275 aaPredicted RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 EID2Q8N6I1 236 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 MCFD2Q8NI22 146 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 KLHL6Q8WZ60 621 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 TCEAL3Q969E4 200 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 CCDC74AQ96AQ1 378 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 CNRIP1Q96F85 164 aaPredicted RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 DOHHQ9BU89 302 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 DCSTAMPQ9H295 470 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 GLIPR2Q9H4G4 154 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 EPS8L2Q9H6S3 715 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 SLC35C2Q9NQQ7 365 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 POLE4Q9NR33 117 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 ATXN7L1Q9ULK2 861 aaPredicted RBP12.59□□□□□ -0.39
UBA3-201ENST00000349511 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBA3-201ENST00000349511 PADI2Q9Y2J8 665 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 TESMINQ9Y4I5 508 aa12.59□□□□□ -0.39
UBA3-201ENST00000349511 TNFRSF11BO00300 401 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 CNOT3O75175 753 aaKnown RBP12.58□□□□□ -0.4
UBA3-201ENST00000349511 MED26O95402 600 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 DRD2P14416 443 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 CPN2P22792 545 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 CD40LGP29965 261 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 C21orf33P30042 268 aaPredicted RBP12.58□□□□□ -0.4
UBA3-201ENST00000349511 CSF2RBP32927 897 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 PCGF2P35227 344 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 GGT2P36268 569 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 CLK1P49759 484 aaKnown RBP12.58□□□□□ -0.4
UBA3-201ENST00000349511 NCBP2P52298 156 aaKnown RBP eCLIP12.58□□□□□ -0.4
UBA3-201ENST00000349511 PPP5CP53041 499 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 LIM2P55344 173 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 SIM1P81133 766 aaPredicted RBP12.58□□□□□ -0.4
UBA3-201ENST00000349511 ID2Q02363 134 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 MAPK11Q15759 364 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 SLC22A16Q86VW1 577 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 RNF130Q86XS8 419 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 DNAJC22Q8N4W6 341 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 METTL27Q8N6F8 245 aaPredicted RBP12.58□□□□□ -0.4
UBA3-201ENST00000349511 ZNF655Q8N720 491 aaPredicted RBP12.58□□□□□ -0.4
UBA3-201ENST00000349511 OR9A4Q8NGU2 314 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 RHOXF1Q8NHV9 184 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 SPPL2AQ8TCT8 520 aa12.58□□□□□ -0.4
UBA3-201ENST00000349511 DOK4Q8TEW6 326 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms