RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 EIF3LQ9Y262 564 aaKnown RBP20.32■□□□□ 0.84
SNX3-202ENST00000349379 ANKRD33BA6NCL7 494 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 HMGB1P1B2RPK0 211 aaPredicted RBP20.31■□□□□ 0.84
SNX3-202ENST00000349379 G3V3Y1 287 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 SEMA7AO75326 666 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 ERN1O75460 977 aaKnown RBP20.31■□□□□ 0.84
SNX3-202ENST00000349379 PPM1BO75688 479 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 ABCB1P08183 1280 aaPredicted RBP20.31■□□□□ 0.84
SNX3-202ENST00000349379 G6PDP11413 515 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 PIGAP37287 484 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 DNASE1L1P49184 302 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 FBXW4P57775 412 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 MLC1Q15049 377 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 NPSR1Q6W5P4 371 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 RGS9BPQ6ZS82 235 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 LARP4Q71RC2 724 aaKnown RBP eCLIP20.31■□□□□ 0.847e-6■□□□□ 9
SNX3-202ENST00000349379 CHERPQ8IWX8 916 aaKnown RBP20.31■□□□□ 0.84
SNX3-202ENST00000349379 ZFP28Q8NHY6 868 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 COQ8BQ96D53 544 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 OMA1Q96E52 524 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 TTTY12Q9BZ98 90 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 IL1RL2Q9HB29 575 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 PLSCR2Q9NRY7 297 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 TUBA8Q9NY65 449 aaPredicted RBP20.31■□□□□ 0.84
SNX3-202ENST00000349379 NTMQ9P121 344 aa20.31■□□□□ 0.84
SNX3-202ENST00000349379 SDHDO14521 159 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 TP53I11O14683 189 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 HS6ST1O60243 411 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 DDX5P17844 614 aaKnown RBP20.3■□□□□ 0.84
SNX3-202ENST00000349379 PRPS1L1P21108 318 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 CLDN8P56748 225 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 CORO7P57737 925 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 PSG6Q00889 435 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 HSPB3Q12988 150 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 CMPK2Q5EBM0 449 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 TBCELQ5QJ74 424 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 PRAMEF20Q5VT98 475 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 OGFOD2Q6N063 350 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 TMEM81Q6P7N7 255 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 SLC34A3Q8N130 599 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 KRTCAP2Q8N6L1 136 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 OR7A2PQ8NGA2 310 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 ZNF75CPQ92670 426 aaPredicted RBP20.3■□□□□ 0.84
SNX3-202ENST00000349379 HOXB13Q92826 284 aaPredicted RBP20.3■□□□□ 0.84
SNX3-202ENST00000349379 HGDQ93099 445 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 ZDHHC11Q9H8X9 412 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 DDX18Q9NVP1 670 aaKnown RBP20.3■□□□□ 0.84
SNX3-202ENST00000349379 ERRFI1Q9UJM3 462 aaPredicted RBP20.3■□□□□ 0.84
SNX3-202ENST00000349379 OSGIN2Q9Y236 505 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 ZNF835Q9Y2P0 537 aa20.3■□□□□ 0.84
SNX3-202ENST00000349379 LRRK2Q5S007 2527 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 TFECO14948 347 aaPredicted RBP20.29■□□□□ 0.84
SNX3-202ENST00000349379 HDAC3O15379 428 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 LAMP1P11279 417 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 CDK9P50750 372 aaKnown RBP20.29■□□□□ 0.84
SNX3-202ENST00000349379 DIO3P55073 304 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 MANFP55145 182 aaKnown RBP20.29■□□□□ 0.84
SNX3-202ENST00000349379 PSPHP78330 225 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 PLCXD2Q0VAA5 305 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 CAMKMTQ7Z624 323 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 GHDCQ8N2G8 530 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 NATD1Q8N6N6 113 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 OR5M3Q8NGP4 307 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 SLC35A4Q96G79 324 aa20.29■□□□□ 0.84
SNX3-202ENST00000349379 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.29■□□□□ 0.84
SNX3-202ENST00000349379 OR6C70A6NIJ9 312 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 LRRC3CA6NJW4 275 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 ACOT7O00154 380 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 ANKRD28O15084 1053 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 TSPAN2O60636 221 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 LBPP18428 481 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.28■□□□□ 0.841e-7■■■■■ 32.6
SNX3-202ENST00000349379 C4orf17Q53FE4 359 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 Q6ZPB1 254 aaPredicted RBP20.28■□□□□ 0.84
SNX3-202ENST00000349379 NUP54Q7Z3B4 507 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 SLC22A16Q86VW1 577 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 WDR75Q8IWA0 830 aaKnown RBP20.28■□□□□ 0.84
SNX3-202ENST00000349379 GOLGA6L1Q8N7Z2 621 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 OR52N2Q8NGI0 321 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 PSMA8Q8TAA3 256 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 NUDT8Q8WV74 236 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 DIO2Q92813 273 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 TMBIM1Q969X1 311 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 LMF2Q9BU23 707 aaKnown RBP20.28■□□□□ 0.84
SNX3-202ENST00000349379 ANGPTL4Q9BY76 406 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 SIRT3Q9NTG7 399 aaPredicted RBP20.28■□□□□ 0.84
SNX3-202ENST00000349379 MARCOQ9UEW3 520 aaPredicted RBP20.28■□□□□ 0.84
SNX3-202ENST00000349379 MAPRE3Q9UPY8 281 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 SLC5A6Q9Y289 635 aa20.28■□□□□ 0.84
SNX3-202ENST00000349379 NCOA6Q14686 2063 aaPredicted RBP20.28■□□□□ 0.84
SNX3-202ENST00000349379 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.27■□□□□ 0.84
SNX3-202ENST00000349379 WIPF3A6NGB9 483 aa20.27■□□□□ 0.84
SNX3-202ENST00000349379 SLCO1B7G3V0H7 640 aa20.27■□□□□ 0.84
SNX3-202ENST00000349379 UGT2B11O75310 529 aa20.27■□□□□ 0.84
SNX3-202ENST00000349379 TRIM3O75382 744 aaPredicted RBP20.27■□□□□ 0.84
SNX3-202ENST00000349379 AGFG2O95081 481 aa20.27■□□□□ 0.84
SNX3-202ENST00000349379 MAP3K8P41279 467 aa20.27■□□□□ 0.84
SNX3-202ENST00000349379 CASP3P42574 277 aa20.27■□□□□ 0.84
SNX3-202ENST00000349379 PPIAP62937 165 aaKnown RBP20.27■□□□□ 0.84
SNX3-202ENST00000349379 RPP38P78345 283 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms