RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 OR5K3A6NET4 321 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 AGR2O95994 175 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 CPMP14384 443 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 NR4A1P22736 598 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 C21orf33P30042 268 aaPredicted RBP19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 NUDT6P53370 316 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 OLR1P78380 273 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 SMAD2Q15796 467 aaKnown RBP19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 FAM214AQ32MH5 1076 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 OR4N5Q8IXE1 308 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 MAN2C1Q9NTJ4 1040 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 NDOR1Q9UHB4 597 aa19.08■□□□□ 0.65
CHRNA3-202ENST00000348639 IGHV1OR15-9A0A0B4J2B8 117 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 B4DGG1 531 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 M0R129 80 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 ZNF217O75362 1048 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 LCKP06239 509 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 PORP16435 677 aaPredicted RBP19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 ENTPD1P49961 510 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 EMP3P54852 163 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 TARDBPQ13148 414 aaKnown RBP eCLIP19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 PTCHD4Q6ZW05 846 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 P2RY8Q86VZ1 359 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 ZNF687Q8N1G0 1237 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 SLC16A11Q8NCK7 471 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 ZDHHC1Q8WTX9 485 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 POLR2J3Q9H1A7 115 aaKnown RBP19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 OCEL1Q9H607 264 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 PLGRKTQ9HBL7 147 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 NECTIN3Q9NQS3 549 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 GPR83Q9NYM4 423 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 COLQQ9Y215 455 aaPredicted RBP19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 SPACA6W5XKT8 324 aa19.08■□□□□ 0.64
CHRNA3-202ENST00000348639 TMEM265A0A087WTH1 108 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 ZNF860A6NHJ4 632 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 SLC22A1O15245 554 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 FOXD2O60548 495 aaPredicted RBP19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 NME6O75414 186 aaPredicted RBP19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 TYRP1P17643 537 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 PPP1CAP62136 330 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 CD300LDQ6UXZ3 194 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 PRSS41Q7RTY9 318 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 ZNF438Q7Z4V0 828 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 CSNK1A1LQ8N752 337 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 ZG16BQ96DA0 208 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 ARHGDIGQ99819 225 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 COX10Q12887 443 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 SLX4IPQ5VYV7 408 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 WDR53Q7Z5U6 358 aaPredicted RBP19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 VRK2Q86Y07 508 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 TMEFF1Q8IYR6 380 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 NR4A3Q92570 626 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 IL21RQ9HBE5 538 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 CLN6Q9NWW5 311 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 SELENONQ9NZV5 590 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 SLC13A4Q9UKG4 626 aa19.07■□□□□ 0.64
CHRNA3-202ENST00000348639 TLR4O00206 839 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 TPST2O60704 377 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 GALR3O60755 368 aaPredicted RBP19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 CLPXO76031 633 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 ZIC2O95409 532 aaPredicted RBP19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 SOX14O95416 240 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 PRKAR1BP31321 381 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 SOX18P35713 384 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 PDX1P52945 283 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 SNRPGP62308 76 aaKnown RBP19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 ALDH6A1Q02252 535 aaKnown RBP19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 NDUFA9Q16795 377 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 INAVAQ3KP66 663 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 ZNF628Q5EBL2 1059 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 ARMC6Q6NXE6 501 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 STX19Q8N4C7 294 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 MORN4Q8NDC4 146 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 OR4K5Q8NGD3 323 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 LRRC61Q9BV99 259 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 ITPAQ9BY32 194 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 FOXQ1Q9C009 403 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 SEMA6CQ9H3T2 930 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 TRIM45Q9H8W5 580 aaPredicted RBP19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 POMT2Q9UKY4 750 aa19.06■□□□□ 0.64
CHRNA3-202ENST00000348639 CYR61O00622 381 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 FCMRO60667 390 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 ATP1B1P05026 303 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 STSP08842 583 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 INHBBP09529 407 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 VSX2P58304 361 aaPredicted RBP19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 ST3GAL4Q11206 333 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 MOGQ16653 247 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 C12orf73Q69YU5 71 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 CROCCP3Q8IVE0 287 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 B3GNT7Q8NFL0 401 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 SLC9A6Q92581 669 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 CDS1Q92903 461 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 C11orf16Q9NQ32 467 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 CNOT2Q9NZN8 540 aaKnown RBP19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 C19orf53Q9UNZ5 99 aaPredicted RBP19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 CHST2Q9Y4C5 530 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 EFCAB10A6NFE3 127 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 FAM170BA6NMN3 283 aa19.05■□□□□ 0.64
CHRNA3-202ENST00000348639 H3BN98 237 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms