RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 WRAP53Q9BUR4 548 aaKnown RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 CLEC4MQ9H2X3 399 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 IGFLR1Q9H665 355 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 A4GALTQ9NPC4 353 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 SEMA3GQ9NS98 782 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ASB6Q9NWX5 421 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 B4GALT6Q9UBX8 382 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 FKBP7Q9Y680 259 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 TRBV4-1A0A0J9YWV2 114 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 EDDM13A0A1B0GTR0 161 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 SGTAO43765 313 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 TSPAN9O75954 239 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 PEPDP12955 493 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 IFI30P13284 250 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 GSTM3P21266 225 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ETV5P41161 510 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ETV1P50549 477 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 HSF2Q03933 536 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 DDX39BQ13838 428 aaKnown RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 HNRNPA1L2Q32P51 320 aaKnown RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 SYT14P1Q58G82 188 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 TCEAL5Q5H9L2 206 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF57Q68EA5 555 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 TANGO2Q6ICL3 276 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 PGBD2Q6P3X8 592 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 VITQ6UXI7 678 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 DPPA4Q7L190 304 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 GALNT11Q8NCW6 608 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 KCTD12Q96CX2 325 aaKnown RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF582Q96NG8 517 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-202ENST00000347617 SORCS2Q96PQ0 1159 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 GALNT9Q9HCQ5 603 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 B3GAT2Q9NPZ5 323 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 COPZ2Q9P299 210 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 CHD7Q9P2D1 2997 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ACAD8Q9UKU7 415 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 PDE4DIPQ5VU43 2346 aa14.98□□□□□ -0.01
HMGA1-202ENST00000347617 ISM1B1AKI9 464 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 FOXE1O00358 373 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-202ENST00000347617 FABP7O15540 132 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 PRODHO43272 600 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 CHP2O43745 196 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 HPGDSO60760 199 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 RECKO95980 971 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 SOD1P00441 154 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 FURINP09958 794 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF8P17098 575 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-202ENST00000347617 C4BPBP20851 252 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 EVI2BP34910 448 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 BDKRB1P46663 353 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 RAG2P55895 527 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 RUNX3Q13761 415 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 MFSD13AQ14CX5 517 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 GRK1Q15835 563 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 MINDY4Q4G0A6 757 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF385BQ569K4 471 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 TJAP1Q5JTD0 557 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 GPR139Q6DWJ6 353 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 SLC36A4Q6YBV0 504 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF852Q6ZMS4 543 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 KCTD20Q7Z5Y7 419 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 LRRC56Q8IYG6 542 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-202ENST00000347617 NRSN1Q8IZ57 195 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 UBE2J2Q8N2K1 259 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 SORCS1Q8WY21 1168 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 TIFAQ96CG3 184 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 ZNF578Q96N58 590 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-202ENST00000347617 ARHGAP9Q9BRR9 750 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 NLNQ9BYT8 704 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 PPIL3Q9H2H8 161 aaKnown RBP14.97□□□□□ -0.01
HMGA1-202ENST00000347617 KCNN2Q9H2S1 579 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 CUEDC1Q9NWM3 386 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-202ENST00000347617 CBLCQ9ULV8 474 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 ICKQ9UPZ9 632 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 ITM2BQ9Y287 266 aa14.97□□□□□ -0.01
HMGA1-202ENST00000347617 PRRT4C9JH25 899 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 I3L521 148 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 FFAR1O14842 300 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 CTSLP07711 333 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 IL32P24001 234 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 SSTR4P31391 388 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 ETV3P41162 512 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 SLC6A11P48066 632 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 SMSP52788 366 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 RAB14P61106 215 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 SEMG2Q02383 582 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 PLA1AQ53H76 456 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 MED27Q6P2C8 311 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 NUDT18Q6ZVK8 323 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 ADGRG3Q86Y34 549 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 ADGRF3Q8IZF5 1079 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 OR8H3Q8N146 312 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 RNF175Q8N4F7 328 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 OR7G3Q8NG95 312 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 SCMH1Q96GD3 660 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 FUZQ9BT04 418 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 S1PR5Q9H228 398 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 TVP23BQ9NYZ1 205 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 EMC3Q9P0I2 261 aa14.96□□□□□ -0.01
HMGA1-202ENST00000347617 UBQLN2Q9UHD9 624 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms