RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 SMUG1Q53HV7 270 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 TMEM107Q6UX40 140 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 SHFQ7M4L6 423 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 CCDC116Q8IYX3 515 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 ZNF486Q96H40 463 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 MSLNLQ96KJ4 702 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 TIGARQ9NQ88 270 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 KLHL20Q9Y2M5 609 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 SCN3AQ9NY46 2000 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 MID1O15344 667 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 NFATC1O95644 943 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 AIFM1O95831 613 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 PKLRP30613 574 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 COPZ1P61923 177 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 HNRNPA0Q13151 305 aaKnown RBP13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 IRF4Q15306 451 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 C3orf38Q5JPI3 329 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 KIAA1211LQ6NV74 962 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 TMEM64Q6YI46 380 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 TRIM69Q86WT6 500 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 FBXL6Q8N531 539 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 ZNF485Q8NCK3 441 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 SUSD6Q92537 303 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 SEMA4GQ9NTN9 838 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 MRPS18AQ9NVS2 196 aaKnown RBP13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 KCNK6Q9Y257 313 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 SLC9A8Q9Y2E8 581 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 NTNG1Q9Y2I2 539 aa13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 SPIN1Q9Y657 262 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF1-202ENST00000347545 PRICKLE3O43900 615 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 PPP2R1BP30154 601 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 SNAPC1Q16533 368 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 NDUFA9Q16795 377 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 C2orf27AQ580R0 203 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 VRK2Q86Y07 508 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 SETD6Q8TBK2 473 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 TMEM163Q8TC26 289 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 TMCO6Q96DC7 493 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 CLIP3Q96DZ5 547 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 RNFT2Q96EX2 444 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 ASB16Q96NS5 453 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 BBS4Q96RK4 519 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 DCLRE1CQ96SD1 692 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 SAP130Q9H0E3 1048 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 SLC38A1Q9H2H9 487 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 FGF20Q9NP95 211 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 CNIH4Q9P003 139 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 PCDHGB2Q9Y5G2 931 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 DNMT3AQ9Y6K1 912 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 C1QTNF3-AMACRE9PGA6 284 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 CCNKO75909 580 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 IL1AP01583 271 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 APOA1P02647 267 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 ACP2P11117 423 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 TRHRP34981 398 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 SOX18P35713 384 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 WNT4P56705 351 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 ATAD3CQ5T2N8 411 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 ABHD17CQ6PCB6 329 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 C11orf74Q86VG3 221 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 ACOT4Q8N9L9 421 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 SFXN5Q8TD22 340 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 GATAD2BQ8WXI9 593 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 RAB7BQ96AH8 199 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 TM9SF2Q99805 663 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 PINK1Q9BXM7 581 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 OSGEPL1Q9H4B0 414 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 RERGLQ9H628 205 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 NEK6Q9HC98 313 aa13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 IMP3Q9NV31 184 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 ZFR2Q9UPR6 939 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
ARHGEF1-202ENST00000347545 OR52A4PA6NMU1 304 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 ERI3O43414 337 aaKnown RBP13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 UBXN7O94888 489 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 LALBAP00709 142 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 THY1P04216 161 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 LIMS3P0CW19 117 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 LIMS4P0CW20 117 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 ACADMP11310 421 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 HIST1H1TP22492 207 aaPredicted RBP13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 ATP5A1P25705 553 aaKnown RBP13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 CERS1P27544 350 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 NTSP30990 170 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 SDC2P34741 201 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 RAB28P51157 221 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 SMSP52788 366 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 CHRNEQ04844 493 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 C1DQ13901 141 aaKnown RBP13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 SLC9A6Q92581 669 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 OR7D2Q96RA2 312 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 ARHGDIGQ99819 225 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 TRMT61BQ9BVS5 477 aaKnown RBP13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 NPAP1Q9NZP6 1156 aa13.65□□□□□ -0.23
ARHGEF1-202ENST00000347545 XIRP2A4UGR9 3374 aa13.64□□□□□ -0.23
ARHGEF1-202ENST00000347545 PRR19A6NJB7 356 aa13.64□□□□□ -0.23
ARHGEF1-202ENST00000347545 FGBP02675 491 aa13.64□□□□□ -0.23
ARHGEF1-202ENST00000347545 WASP42768 502 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms