RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CKMT1AP12532 417 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 BPIP17213 487 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 OPRL1P41146 370 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 GPR143P51810 404 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 NKX2-5P52952 324 aaPredicted RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ID2Q02363 134 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 IQCF2Q8IXL9 164 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 SCRN2Q96FV2 425 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 FBXO9Q9UK97 447 aaPredicted RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 PCDHGA8Q9Y5G5 932 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 PRSS38A1L453 326 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 SAGE2PA6NJ88 616 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 RPS17P08708 135 aaKnown RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 MSX1P28360 303 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 GABRA3P34903 492 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 CDK6Q00534 326 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 LINC01465Q8N7H1 131 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 OR9K2Q8NGE7 335 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 PROKR1Q8TCW9 393 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ADAD1Q96M93 576 aaKnown RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 PELI2Q9HAT8 420 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 WNT16Q9UBV4 365 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 PRSS21Q9Y6M0 314 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 SLC35F4A4IF30 521 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 EMC8O43402 210 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 SMAD6O43541 496 aaKnown RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 CH25HO95992 272 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 POLR2IP36954 125 aaKnown RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 RPS26P62854 115 aaKnown RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 GPLD1P80108 840 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 TUBA3CQ13748 450 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 STK11Q15831 433 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF404Q494X3 552 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 KLHL22Q53GT1 634 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 TAS1R1Q7RTX1 841 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 SCML4Q8N228 414 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 GHDCQ8N2G8 530 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 TRMT10AQ8TBZ6 339 aaKnown RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 PIK3R3Q92569 461 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ECHDC3Q96DC8 303 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 GPR78Q96P69 363 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 SERINC2Q96SA4 455 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 KLF16Q9BXK1 252 aaPredicted RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF334Q9HCZ1 680 aaPredicted RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 CPNE7Q9UBL6 633 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ACOX3O15254 700 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ITGA10O75578 1167 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 SBK3P0C264 359 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 C8orf89P0DMQ9 161 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ANXA8P13928 327 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 MAGEA12P43365 314 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 BMXP51813 675 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 ARFRP1Q13795 201 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 VMACQ2NL98 169 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 PSD4Q8NDX1 1056 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 OR2L3Q8NG85 312 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 BBS10Q8TAM1 723 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 MGME1Q9BQP7 344 aa10.33□□□□□ -0.76
CLCN6-202ENST00000346436 PAK1IP1Q9NWT1 392 aaPredicted RBP10.33□□□□□ -0.76
CLCN6-202ENST00000346436 COL5A3P25940 1745 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 A0A096LPI6 279 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 FAM240BA0A1B0GVZ2 78 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 I6L893 689 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 CYB5BO43169 146 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 LCKP06239 509 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 ITGA5P08648 1049 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 GLP1RP43220 463 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 MLLT10P55197 1068 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 DCDP81605 110 aaKnown RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 CLCA4Q14CN2 919 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 PON3Q15166 354 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 CTSL3PQ5NE16 218 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 C6orf15Q6UXA7 325 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 OR10H4Q8NGA5 316 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 OR9A4Q8NGU2 314 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 OR8S1Q8NH09 359 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 GCDHQ92947 438 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 TCEAL4Q96EI5 215 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 LOC285095A0A1B0GVY8 99 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 GLOD5A6NK44 160 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 F3P13726 295 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 ALG10Q5BKT4 473 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 PLET1Q6UQ28 207 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 NLGN4XQ8N0W4 816 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 PELI3Q8N2H9 469 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 ABHD11Q8NFV4 315 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 TCTN2Q96GX1 697 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 UCK2Q9BZX2 261 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 SRPX2O60687 465 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 BCAS1O75363 584 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 TPOP07202 933 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 STSP08842 583 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 MYOGP15173 224 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 KDELR2P33947 212 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 ZNF140P52738 457 aaPredicted RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 RPL19P84098 196 aaKnown RBP10.32□□□□□ -0.76
CLCN6-202ENST00000346436 ATG9BQ674R7 924 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 LAPTM4BQ86VI4 370 aa10.32□□□□□ -0.76
CLCN6-202ENST00000346436 PAPD5Q8NDF8 572 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms