RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 PI4KAP42356 2102 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 UNC13CQ8NB66 2214 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 C5orf58C9J3I9 102 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 J3KTA2 159 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 K7ESF4 209 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 B3GALT2O43825 422 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 UBXN7O94888 489 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 PABPC4LP0CB38 370 aaKnown RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 ALOX12P18054 663 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CSNK2A2P19784 350 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 FPR1P21462 350 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 MATN1P21941 496 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CPN2P22792 545 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 RRM2P31350 389 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 DAPP51397 102 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 VSX2P58304 361 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CTAG1AP78358 180 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 SIM1P81133 766 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 TNFRSF17Q02223 184 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 KCNAB2Q13303 367 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 SYPL1Q16563 259 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 DUSP7Q16829 419 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 IFI44LQ53G44 452 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 EXOSC6Q5RKV6 272 aaKnown RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM201Q5SNT2 666 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 ARMC6Q6NXE6 501 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 TTC33Q6PID6 262 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 IQCHQ86VS3 1027 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 GKN2Q86XP6 184 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CROCCP3Q8IVE0 287 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 OR4N5Q8IXE1 308 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CSNK1A1LQ8N752 337 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 TSPAN14Q8NG11 270 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 OR5T3Q8NGG3 340 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 XAGE5Q8WWM1 108 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 KAT2AQ92830 837 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 GABARAPL1Q9H0R8 117 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 SEMA6CQ9H3T2 930 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 REEP1Q9H902 201 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 IL21RQ9HBE5 538 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 THUMPD1Q9NXG2 353 aaKnown RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CRIM1Q9NZV1 1036 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 TESMINQ9Y4I5 508 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 SLC28A2O43868 658 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 HMGN2P05204 90 aaKnown RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 GSTT2P0CG29 244 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 GSTT2BP0CG30 244 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 FOSL1P15407 271 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 MC3RP41968 323 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 NXPH1P58417 271 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 ID2Q02363 134 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 RELAQ04206 551 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 DCTN2Q13561 401 aaKnown RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 LASP1Q14847 261 aaKnown RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CEBPEQ15744 281 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 DEFB133Q30KQ1 61 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CDCP2Q5VXM1 449 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 SHISA2Q6UWI4 295 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 ABHD13Q7L211 337 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 SLC30A8Q8IWU4 369 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CAMKK1Q8N5S9 505 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 ABTB1Q969K4 478 aaPredicted RBP8.66□□□□□ -1.02
ATG4A-202ENST00000345734 RDH12Q96NR8 316 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 PCED1AQ9H1Q7 454 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 SEMA3GQ9NS98 782 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 GIMAP4Q9NUV9 329 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 UCKL1Q9NWZ5 548 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 ZSCAN32Q9NX65 697 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 DAPP1Q9UN19 280 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF780BQ9Y6R6 833 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 CACNA1EQ15878 2313 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 A0A0C4DFX4 3053 aa8.66□□□□□ -1.02
ATG4A-202ENST00000345734 URADA6NGE7 173 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 SLC9B1P1A6NJY1 282 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 VILLO15195 856 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 SERPINB7O75635 380 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 OR6B1O95007 311 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 IFNA14P01570 189 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 CYP4B1P13584 511 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 CD247P20963 164 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 CDH3P22223 829 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 IGFBP5P24593 272 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 ELK4P28324 431 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 MPIP34949 423 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 BUD31P41223 144 aaPredicted RBP8.65□□□□□ -1.02
ATG4A-202ENST00000345734 FASLGP48023 281 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 CXCL12P48061 93 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 XKP51811 444 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 IL1RL1Q01638 556 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 PUM1Q14671 1186 aaKnown RBP eCLIP8.65□□□□□ -1.02
ATG4A-202ENST00000345734 KDM4DQ6B0I6 523 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM64Q6YI46 380 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 FAM92BQ6ZTR7 304 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 HMGN2P46Q86SG4 172 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 AVL9Q8NBF6 648 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM52Q8NDY8 209 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 GPR32P1Q8NGA4 272 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 OR52J3Q8NH60 311 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 FNDC8Q8TC99 324 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms