RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SCUBE2Q9NQ36 999 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CACNA1FO60840 1977 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 LILRB3O75022 631 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CBSLP0DN79 551 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CBSP35520 551 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 RBP2P50120 134 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TAS2R50P59544 299 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 RBMS2Q15434 407 aaKnown RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 UGT8Q16880 541 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NOTUMQ6P988 496 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF248Q8NDW4 579 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 M1APQ8TC57 530 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 GPR151Q8TDV0 419 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SIGLEC11Q96RL6 698 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 KATNBL1Q9H079 304 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ACTR8Q9H981 624 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ERVK-5Q9HDB9 667 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 ZFP37Q9Y6Q3 630 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 NOTCH3Q9UM47 2321 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 CNTNAP5Q8WYK1 1306 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 USP17L3A6NCW0 530 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 KCNAB3O43448 404 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 MT-ND5P03915 603 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 IMPA1P29218 277 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 TAF1AQ15573 450 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SPRED1Q7Z699 444 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SYT12Q8IV01 421 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 OR13C9Q8NGT0 318 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SERINC1Q9NRX5 453 aa3.6□□□□□ -1.83
SYNE2-202ENST00000344113 SPATA31A6Q5VVP1 1343 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 RFXANKO14593 260 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 HBQ1P09105 142 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GIPP09681 153 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TAS2R20P59543 309 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CEBPEQ15744 281 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 C9orf64Q5T6V5 341 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 BIVMQ86UB2 503 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 FTMTQ8N4E7 242 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR5R1Q8NH85 324 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SPPL2AQ8TCT8 520 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TAS1R2Q8TE23 839 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 AKT1S1Q96B36 256 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 COQ8BQ96D53 544 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 VAMP8Q9BV40 100 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 DDA1Q9BW61 102 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 DOCK7Q96N67 2140 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PIP5K1BO14986 540 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GLUD1P00367 558 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ARHGEF7Q14155 803 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 P2RY14Q15391 338 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TIGD5Q53EQ6 642 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SFRP5Q5T4F7 317 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 WSCD1Q658N2 575 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 MYPOPQ86VE0 399 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR13G1Q8NGZ3 307 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 HUS1BQ8NHY5 278 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 APH1BQ8WW43 257 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 FOXRED1Q96CU9 486 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 L3HYPDHQ96EM0 354 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 RBCK1Q9BYM8 510 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM185BQ9H7F4 350 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 RPF1Q9H9Y2 349 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 MGAT4CQ9UBM8 478 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ERVV-1B6SEH8 477 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 F5H5P2 479 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GTPBP1O00178 669 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 FAAHO00519 579 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 BCKDHAP12694 445 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF7P17097 686 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 RAB28P51157 221 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GALCP54803 685 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CXADRP78310 365 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ETFDHQ16134 617 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PSG3Q16557 428 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TUSC1Q2TAM9 212 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 MED27Q6P2C8 311 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR4N5Q8IXE1 308 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZDHHC15Q96MV8 337 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR52A1Q9UKL2 312 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ACTL7AQ9Y615 435 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GPR137BO60478 399 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 RPLP2P05387 115 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ITGB7P26010 798 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 HMGCS2P54868 508 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SCAND1P57086 179 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 GPAT2Q6NUI2 795 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM151BQ8IW70 566 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 PQLC3Q8N755 202 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR56B1Q8NGI3 324 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 OR5M1Q8NGP8 315 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SEPHS2Q99611 448 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF426Q9BUY5 554 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 SLC35D1Q9NTN3 355 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM184BQ9Y519 407 aaPredicted RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 LOC100130705A0A1B0GUX0 176 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 F5H5T6 163 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 CD44P16070 742 aaKnown RBP3.59□□□□□ -1.83
SYNE2-202ENST00000344113 BMP8BP34820 402 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 DIO1P49895 249 aa3.59□□□□□ -1.83
SYNE2-202ENST00000344113 HNRNPA3P51991 378 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms