RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 COLEC10Q9Y6Z7 277 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 USP34Q70CQ2 3546 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 MDC1Q14676 2089 aaKnown RBP18.9■□□□□ 0.62
SPG7-202ENST00000341316 A0A1W2PRQ8 180 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 BUD31P41223 144 aaPredicted RBP18.9■□□□□ 0.62
SPG7-202ENST00000341316 NR4A2P43354 598 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 BTN3A2P78410 334 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 SF3B4Q15427 424 aaKnown RBP eCLIP18.9■□□□□ 0.621e-6■■■■□ 23.5
SPG7-202ENST00000341316 LTB4RQ15722 352 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 TMEM31Q5JXX7 168 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 PLAG1Q6DJT9 500 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 SDE2Q6IQ49 451 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 SPATC1Q76KD6 591 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 ZER1Q7Z7L7 766 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 CLIP4Q8N3C7 705 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 IQCF1Q8N6M8 205 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 CELF2-AS1Q8N7Q2 184 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 EQTNQ9NQ60 294 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 SNX7Q9UNH6 387 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 MN1Q10571 1320 aaPredicted RBP18.9■□□□□ 0.62
SPG7-202ENST00000341316 BRWD1Q9NSI6 2320 aa18.9■□□□□ 0.62
SPG7-202ENST00000341316 DYRK3O43781 588 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 FHP07954 510 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 CSNK2A2P19784 350 aaPredicted RBP18.89■□□□□ 0.61
SPG7-202ENST00000341316 SNRPGP62308 76 aaKnown RBP18.89■□□□□ 0.61
SPG7-202ENST00000341316 TFF2Q03403 129 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 GPAT3Q53EU6 434 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 Q8N9G6 341 aaPredicted RBP18.89■□□□□ 0.61
SPG7-202ENST00000341316 C9orf43Q8TAL5 461 aaPredicted RBP18.89■□□□□ 0.61
SPG7-202ENST00000341316 SLC6A18Q96N87 628 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 MGLLQ99685 303 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 KCNS3Q9BQ31 491 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 OR6C2Q9NZP2 312 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 HEBP2Q9Y5Z4 205 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 SSX4O60224 188 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 GUCY1B2O75343 617 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 TNNI3P19429 210 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 MMP11P24347 488 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 CTHP32929 405 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 SOX6P35712 828 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 SPANXN2Q5MJ10 180 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 MEX3DQ86XN8 651 aaKnown RBP18.89■□□□□ 0.61
SPG7-202ENST00000341316 KAT2AQ92830 837 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 ELP4Q96EB1 424 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 SIPA1Q96FS4 1042 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 BMFQ96LC9 184 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 OR7D2Q96RA2 312 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 FNDC11Q9BVV2 318 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 NUAK2Q9H093 628 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 TMEM168Q9H0V1 697 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 POLMQ9NP87 494 aaPredicted RBP18.89■□□□□ 0.61
SPG7-202ENST00000341316 MKLN1Q9UL63 735 aa18.89■□□□□ 0.61
SPG7-202ENST00000341316 SLITRK5O94991 958 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 EIF2S1P05198 315 aaKnown RBP18.88■□□□□ 0.61
SPG7-202ENST00000341316 ZNF888P0CJ79 500 aaPredicted RBP18.88■□□□□ 0.61
SPG7-202ENST00000341316 ACSL1P33121 698 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 ETV6P41212 452 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 SMIM11AP58511 58 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 CCDC190Q86UF4 302 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 ATCAYQ86WG3 371 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 MORN4Q8NDC4 146 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 OR4K5Q8NGD3 323 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 FLVCR1-AS1Q8TAF5 88 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 SDHCQ99643 169 aaPredicted RBP18.88■□□□□ 0.61
SPG7-202ENST00000341316 KLHL3Q9UH77 587 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 SLC9A8Q9Y2E8 581 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 ARHGAP33O14559 1287 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 CTDSP2O14595 271 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 FRS3O43559 492 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 DNAJB6O75190 326 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 NTN1O95631 604 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 ARFIP1P53367 373 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 DEFA1P59665 94 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 DEFA3P59666 94 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 KIAA1024LP59773 190 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 STXBP1P61764 594 aaKnown RBP18.88■□□□□ 0.61
SPG7-202ENST00000341316 BHLHB9Q6PI77 547 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 C19orf48Q6RUI8 117 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 FAM92BQ6ZTR7 304 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 IQCHQ86VS3 1027 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 TCEANCQ8N8B7 351 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 NUP43Q8NFH3 380 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 OR56A1Q8NGH5 318 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 WDR36Q8NI36 951 aaKnown RBP18.88■□□□□ 0.61
SPG7-202ENST00000341316 MCOLN1Q9GZU1 580 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 SLC38A1Q9H2H9 487 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 C14orf119Q9NWQ9 140 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 CLEC2DQ9UHP7 191 aa18.88■□□□□ 0.61
SPG7-202ENST00000341316 GPR55Q9Y2T6 319 aaPredicted RBP18.88■□□□□ 0.61
SPG7-202ENST00000341316 PNMA8CA0A1B0GUJ8 204 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 EMC8O43402 210 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 ZIC2O95409 532 aaPredicted RBP18.87■□□□□ 0.61
SPG7-202ENST00000341316 MPIP34949 423 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 CHRNEQ04844 493 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 KRR1Q13601 381 aaKnown RBP18.87■□□□□ 0.61
SPG7-202ENST00000341316 NFATC4Q14934 902 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 CEBPEQ15744 281 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 SSX1Q16384 188 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 TMEM201Q5SNT2 666 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 FBXO42Q6P3S6 717 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms