RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 RYKP34925 604 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 TRHRP34981 398 aaPredicted RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ARFIP1P53367 373 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 KCNC4Q03721 635 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 MGAT2Q10469 447 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 MAPK14Q16539 360 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF628Q5EBL2 1059 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ZAR1Q86SH2 424 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ZBTB46Q86UZ6 589 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 GATAD2AQ86YP4 633 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 CACTIN-AS1Q8N1I8 211 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 OR2L13Q8N349 312 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 DNAJC22Q8N4W6 341 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 OR4N2Q8NGD1 307 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ADAMTS15Q8TE58 950 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 HDAC2Q92769 488 aaKnown RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF607Q96SK3 696 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 DGCR6LQ9BY27 220 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 EPB41L1Q9H4G0 881 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 CXorf21Q9HAI6 301 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 C3orf14Q9HBI5 128 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 PAPOLBQ9NRJ5 636 aaKnown RBP6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 MAN2C1Q9NTJ4 1040 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 SELENONQ9NZV5 590 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 LRIT1Q9P2V4 623 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 KCNE5Q9UJ90 142 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 KCND3Q9UK17 655 aa6.92□□□□□ -1.3
SRFBP1-201ENST00000339397 FAM221BA6H8Z2 402 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 URADA6NGE7 173 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 A8MVJ9 347 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 E9PQ18 207 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 UGT2B11O75310 529 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 SERPINB7O75635 380 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 PIAS2O75928 621 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 INMTO95050 263 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 GPR75O95800 540 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 LGI1O95970 557 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ADRA2AP08913 450 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ACP2P11117 423 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 MAOAP21397 527 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 C21orf33P30042 268 aaPredicted RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 KRT20P35900 424 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 AVPR1BP47901 424 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 FNTBP49356 437 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 KHKP50053 298 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 HNRNPKP61978 463 aaKnown RBP eCLIP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 BNC1Q01954 994 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 DUSP8Q13202 625 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ELOAQ14241 798 aaKnown RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 MAD2L1BPQ15013 274 aaPredicted RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 PTGES3Q15185 160 aaKnown RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 GPR68Q15743 365 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 RFX4Q33E94 735 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 FHL5Q5TD97 284 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 FIGNL1Q6PIW4 674 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 BCDIN3DQ7Z5W3 292 aaKnown RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 GKN2Q86XP6 184 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 TAGAPQ8N103 731 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 OR56A1Q8NGH5 318 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 FAM81AQ8TBF8 368 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 FBLIM1Q8WUP2 373 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 MPP4Q96JB8 637 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 HRASLS5Q96KN8 279 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 NECAB3Q96P71 396 aaPredicted RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ACTRT3Q9BYD9 372 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 IRAK4Q9NWZ3 460 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 GIN1Q9NXP7 522 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 PHF11Q9UIL8 331 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 DTX4Q9Y2E6 619 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 HCN4Q9Y3Q4 1203 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 GXYLT2A0PJZ3 443 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 TMEM247A6NEH6 219 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 PEX12O00623 359 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 OR10H3O60404 316 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ATE1O95260 518 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ITGA2P17301 1181 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 CBLP22681 906 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 GABRA4P48169 554 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 EMX1Q04741 257 aaPredicted RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 EPS8Q12929 822 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 NNATQ16517 81 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 PRICKLE4Q2TBC4 344 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 PRTGQ2VWP7 1150 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF311Q5JNZ3 666 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 COLEC12Q5KU26 742 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 PODNL1Q6PEZ8 512 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF773Q6PK81 442 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 FRRS1Q6ZNA5 592 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 C16orf62Q7Z3J2 963 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 GPR141Q7Z602 305 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 C17orf82Q86X59 251 aaPredicted RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC35F3Q8IY50 421 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF655Q8N720 491 aaPredicted RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 MIPOL1Q8TD10 442 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 SFXN5Q8TD22 340 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 POP5Q969H6 163 aaKnown RBP6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 DCUN1D5Q9BTE7 237 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 SOHLH2Q9NX45 425 aa6.91□□□□□ -1.3
SRFBP1-201ENST00000339397 MAT2BQ9NZL9 334 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms