RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LRRC36Q1X8D7 754 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 EXOSC6Q5RKV6 272 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FAM199XQ6PEV8 388 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZCCHC12Q6PEW1 402 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FKBP9P1Q75LS8 142 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 C16orf62Q7Z3J2 963 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SMYD1Q8NB12 490 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNF578Q96N58 590 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DEPDC7Q96QD5 511 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TACO1Q9BSH4 297 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PIGUQ9H490 435 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MAGIXQ9H6Y5 334 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 EXD2Q9NVH0 621 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GIN1Q9NXP7 522 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CLCA3PQ9Y6N3 262 aa13.74□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TEX51A0A1B0GUA7 166 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 VSTM2BA6NLU5 285 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CNOT3O75175 753 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 H6PDO95479 791 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 AGR2O95994 175 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IFNA14P01570 189 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 JMJD7P0C870 316 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PEX2P28328 305 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 VHLP40337 213 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 RAB15P59190 212 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ELAVL1Q15717 326 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LANCL3Q6ZV70 420 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 C7orf57Q8NEG2 295 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MR1Q95460 341 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LRFN5Q96NI6 719 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNF607Q96SK3 696 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PHOX2BQ99453 314 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DOHHQ9BU89 302 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OR10A5Q9H207 317 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FOLH1BQ9HBA9 442 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 AGPAT4Q9NRZ5 378 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LIPT1Q9Y234 373 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNF451Q9Y4E5 1061 aa13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HEMK1Q9Y5R4 338 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CUL9Q8IWT3 2517 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SPAARA0A1B0GVQ0 90 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 A8MVJ9 347 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 IDSB3KWA1 339 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CASQ2O14958 399 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PRAMEF2O60811 474 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PDE9AO76083 593 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ALBP02768 609 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FCGR1AP12314 374 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MAP3K8P41279 467 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ELOAQ14241 798 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HEPHL1Q6MZM0 1159 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MRPL14Q6P1L8 145 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNF321PQ8N8H1 164 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZNF615Q8N8J6 731 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GALNT6Q8NCL4 622 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GPR151Q8TDV0 419 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PIK3R3Q92569 461 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FKBP10Q96AY3 582 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SENP5Q96HI0 755 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 COL21A1Q96P44 957 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TRNT1Q96Q11 434 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 TAAR9Q96RI9 348 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 STACQ99469 402 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLC26A1Q9H2B4 701 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 YY1AP1Q9H869 796 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 BCL2L10Q9HD36 194 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DUSP22Q9NRW4 184 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GPN3Q9UHW5 284 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DTX4Q9Y2E6 619 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PCDHGA8Q9Y5G5 932 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 NINQ8N4C6 2090 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CCDC187A0A096LP49 1063 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 A0A0G2JPF8 293 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 A0A1W2PNU3 283 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HNRNPCL3B7ZW38 293 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 PLD2O14939 933 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DYRK3O43781 588 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 MFN2O95140 757 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CLPSP04118 112 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SEMG1P04279 462 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 FTH1P19P0C7X4 201 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HNRNPCL4P0DMR1 293 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 GABRA3P34903 492 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 KCNJ10P78508 379 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CHRNEQ04844 493 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 DUSP7Q16829 419 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ARHGAP11BQ3KRB8 267 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 CYP27C1Q4G0S4 372 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ASCL5Q7RTU5 278 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 HMGN2P46Q86SG4 172 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 ZDHHC21Q8IVQ6 265 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 COX18Q8N8Q8 333 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 C16orf52Q8NHV5 167 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SLC2A12Q8TD20 617 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 LZICQ8WZA0 190 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 SPSB2Q99619 263 aa13.72□□□□□ -0.21
CDK5RAP3-201ENST00000338399 OR8D2Q9GZM6 311 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms