RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 RBM4Q9BWF3 364 aaKnown RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 AMBRA1Q9C0C7 1298 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 ADAP2Q9NPF8 381 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 DUSP22Q9NRW4 184 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SIDT1Q9NXL6 827 aaKnown RBP14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SEC14L3Q9UDX4 400 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 NDOR1Q9UHB4 597 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SRPK3Q9UPE1 567 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 SH3GLB1Q9Y371 365 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 MMACHCQ9Y4U1 282 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 U3KQV3 271 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 DMDP11532 3685 aa14.44□□□□□ -0.1
LIMS1-202ENST00000338045 GALR2O43603 387 aaPredicted RBP14.43□□□□□ -0.1
LIMS1-202ENST00000338045 JRKO75564 520 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 DNAJB5O75953 348 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 MAOAP21397 527 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 GRK6P43250 576 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 MERTKQ12866 999 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 DUSP8Q13202 625 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 EXOSC7Q15024 291 aaKnown RBP14.43□□□□□ -0.1
LIMS1-202ENST00000338045 PDK3Q15120 406 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 ARHGAP11BQ3KRB8 267 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 CYP27C1Q4G0S4 372 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 RHBDD2Q6NTF9 364 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 OLIG3Q7RTU3 272 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 C16orf62Q7Z3J2 963 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 CARM1Q86X55 608 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 RCBTB1Q8NDN9 531 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 DOK4Q8TEW6 326 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 SLC9A6Q92581 669 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 CDS1Q92903 461 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 RIT1Q92963 219 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 ZNF354BQ96LW1 612 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 EPYCQ99645 322 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 PELOQ9BRX2 385 aaKnown RBP14.43□□□□□ -0.1
LIMS1-202ENST00000338045 ADI1Q9BV57 179 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 ANKRD60Q9BZ19 345 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 REEP1Q9H902 201 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 ZNF304Q9HCX3 659 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 SAMHD1Q9Y3Z3 626 aaKnown RBP14.43□□□□□ -0.1
LIMS1-202ENST00000338045 PCDHGB3Q9Y5G1 929 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 ENPP4Q9Y6X5 453 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 FRYLO94915 3013 aa14.43□□□□□ -0.1
LIMS1-202ENST00000338045 A8MVJ9 347 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 ADAMDEC1O15204 470 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 TPD52L2O43399 206 aaKnown RBP14.42□□□□□ -0.1
LIMS1-202ENST00000338045 ZIC2O95409 532 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-202ENST00000338045 SLC36A3Q495N2 470 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 QSOX2Q6ZRP7 698 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 ZNF605Q86T29 641 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 CHDHQ8NE62 594 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-202ENST00000338045 PROX1Q92786 737 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 ZNF578Q96N58 590 aaPredicted RBP14.42□□□□□ -0.1
LIMS1-202ENST00000338045 DGAT2Q96PD7 388 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 GFM1Q96RP9 751 aaKnown RBP14.42□□□□□ -0.1
LIMS1-202ENST00000338045 ARPC5LQ9BPX5 153 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 SMURF2Q9HAU4 748 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 NECTIN3Q9NQS3 549 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 SATB2Q9UPW6 733 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 R4GN57 208 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 SPEGQ15772 3267 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 IGKV3D-11A0A0A0MRZ8 115 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 LNP1A1A4G5 178 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 OR2W5A6NFC9 320 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 D6RAR5 112 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 SOX30O94993 753 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 IFNW1P05000 195 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 ALOX5P09917 674 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 RHCEP18577 417 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 FBLP22087 321 aaKnown RBP14.42□□□□□ -0.1
LIMS1-202ENST00000338045 RRM2P31350 389 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 ARHGDIAP52565 204 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 PDX1P52945 283 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 CHRNEQ04844 493 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 MLIPQ5VWP3 458 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 UGT2A3Q6UWM9 527 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 OR52R1Q8NGF1 315 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 OR6C1Q96RD1 312 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 BARD1Q99728 777 aaKnown RBP14.42□□□□□ -0.1
LIMS1-202ENST00000338045 SYNDIG1Q9H7V2 258 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 UBAP1Q9NZ09 502 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 BLOC1S6Q9UL45 172 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 LYVE1Q9Y5Y7 322 aa14.42□□□□□ -0.1
LIMS1-202ENST00000338045 SEC16AO15027 2179 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 NKX2-2O95096 273 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 SNAP29O95721 258 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 GP1BAP07359 652 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 THRBP10828 461 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 PRKACGP22612 351 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 EMDP50402 254 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 HMGA2P52926 109 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 FUT7Q11130 342 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 TBC1D25Q3MII6 688 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 FRRS1Q6ZNA5 592 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 C7orf57Q8NEG2 295 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 CNDP2Q96KP4 475 aaKnown RBP14.41□□□□□ -0.1
LIMS1-202ENST00000338045 CNBD2Q96M20 576 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 SDF2Q99470 211 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 PIP5K1AQ99755 562 aa14.41□□□□□ -0.1
LIMS1-202ENST00000338045 LMF2Q9BU23 707 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms