RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 HTR3EA5X5Y0 456 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 AGAP5A6NIR3 686 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 C9J4A7 227 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 MEN1O00255 615 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 NUAK1O60285 661 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 CREBL2O60519 120 aaPredicted RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 HNRNPA1P09651 372 aaKnown RBP eCLIP13.05□□□□□ -0.323e-6■□□□□ 10.5
RTN4-202ENST00000337526 GNSP15586 552 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 PRKCAP17252 672 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 FRKP42685 505 aaPredicted RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 GDI2P50395 445 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 ALG10BQ5I7T1 473 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 SFRP4Q6FHJ7 346 aaPredicted RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 MAVSQ7Z434 540 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 OR5AR1Q8NGP9 310 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 CLMPQ9H6B4 373 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 CNIH4Q9P003 139 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 GMPR2Q9P2T1 348 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 C14orf166Q9Y224 244 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 NUP98P52948 1817 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 TRAPPC13A5PLN9 417 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 F5H0A9 414 aaPredicted RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 ZNF26P17031 533 aaPredicted RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 IL1RNP18510 177 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 POLR2IP36954 125 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 SOX3P41225 446 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 VIPR2P41587 438 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 SNRPD2P62316 118 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 APOFQ13790 326 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 VWA5B2Q8N398 1253 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 CSNK1A1LQ8N752 337 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 LINC00597Q9H2U6 94 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 MRPL15Q9P015 296 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 ABI3Q9P2A4 366 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 LYRM1O43325 122 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 LATO43561 262 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 ADRB3P13945 408 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 ARSAP15289 507 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 GRPRP30550 384 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 HOXC12P31275 282 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 OCLNQ16625 522 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 LRRN1Q6UXK5 716 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 BAIAP2L2Q6UXY1 529 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 CBLL1Q75N03 491 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 ZNF584Q8IVC4 421 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 TCEAL8Q8IYN2 117 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 TMEM234Q8WY98 164 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 PPIL3Q9H2H8 161 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 RNF121Q9H920 327 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 VNN3Q9NY84 501 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 TAS2R3Q9NYW6 316 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 NAV1Q8NEY1 1877 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 HEPACAM2A8MVW5 462 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 H7C2Y5 167 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 DRD5P21918 477 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 CFL1P23528 166 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 SELPLGQ14242 412 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 SMN1Q16637 294 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 GKN2Q86XP6 184 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 SYT14Q8NB59 555 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 PDLIM5Q96HC4 596 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 METTL2AQ96IZ6 378 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 SAMD8Q96LT4 415 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 CNN2Q99439 309 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 TMEM184CQ9NVA4 438 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 NUFIP1Q9UHK0 495 aaKnown RBP13.05□□□□□ -0.32
RTN4-202ENST00000337526 CLEC4EQ9ULY5 219 aa13.05□□□□□ -0.32
RTN4-202ENST00000337526 E2F3O00716 465 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 RNGTTO60942 597 aaKnown RBP13.04□□□□□ -0.32
RTN4-202ENST00000337526 GJB3O75712 270 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 CDK1P06493 297 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 UCHL1P09936 223 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 CYBAP13498 195 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 PVALBP20472 110 aaPredicted RBP13.04□□□□□ -0.32
RTN4-202ENST00000337526 HTR2BP41595 481 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 RGS6P49758 472 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 C1orf61Q13536 156 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 GPAT4Q86UL3 456 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 NAXEQ8NCW5 288 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 OR51L1Q8NGJ5 315 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 TESCQ96BS2 214 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 SLC41A3Q96GZ6 507 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 ACTRT3Q9BYD9 372 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 PTGES2Q9H7Z7 377 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 RXFP3Q9NSD7 469 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 COPZ2Q9P299 210 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 EPHA6Q9UF33 1036 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 OR5K4A6NMS3 321 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 ZNF691Q5VV52 312 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 TMEM225Q6GV28 225 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 KCNN1Q92952 543 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 AIFM2Q9BRQ8 373 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 ZNF350Q9GZX5 532 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 ZNF304Q9HCX3 659 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 DMRT3Q9NQL9 472 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 KLHL42Q9P2K6 505 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 USP22Q9UPT9 525 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 PRSS21Q9Y6M0 314 aa13.04□□□□□ -0.32
RTN4-202ENST00000337526 UGT2B10P36537 528 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms