RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PTDSS2Q9BVG9 487 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 NIF3L1Q9GZT8 377 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 UBQLN3Q9H347 655 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 NMRAL1Q9HBL8 299 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PTRH2Q9Y3E5 179 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PTPRJQ12913 1337 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3DA0A087WVF3 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3IA0A087WXS9 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3EA0A087X179 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3KA0A087X1G2 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 A0A1W2PQ09 198 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 LRIT2A6NDA9 550 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3BA6NDS4 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3FA6NER0 549 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3LB9A6J9 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DVL1O14640 695 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TREHO43280 583 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SYT7O43581 403 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 OLFM2O95897 454 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 MT-ND5P03915 603 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3HP0C7X1 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ARRB2P32121 409 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ASPAP45381 313 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 NPBWR2P48146 333 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF157P51786 506 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DVL1P1P54792 670 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 IAH1Q2TAA2 248 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3GQ6DHY5 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3CQ6IPX1 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 BLOC1S3Q6QNY0 202 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMEM184AQ6ZMB5 413 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF620Q6ZNG0 422 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GDPD3Q7L5L3 318 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TBC1D3Q8IZP1 549 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 FRMD1Q8N878 549 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 RAB7BQ96AH8 199 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 EBPLQ9BY08 206 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF518BQ9C0D4 1074 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SLC25A31Q9H0C2 315 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SEMA4AQ9H3S1 761 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PIDD1Q9HB75 910 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CROCC2H7BZ55 1655 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DEPDC5O75140 1603 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CA2P00918 260 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GH2P01242 217 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DHRS4L1P0CG22 281 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 RAP2AP10114 183 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 CASP6P55212 293 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DLX5P56178 289 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 INHBEP58166 350 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 SCGB2B2Q4G0G5 96 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 USP17L2Q6R6M4 530 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF546Q86UE3 836 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PXT1Q8NFP0 134 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 OR5AP2Q8NGF4 316 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF461Q8TAF7 563 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 AENQ8WTP8 325 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 UBE2FQ969M7 185 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 INTS12Q96CB8 462 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TMPRSS4Q9NRS4 437 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PAM16Q9Y3D7 125 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 RAP2CQ9Y3L5 183 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PSMB11A5LHX3 300 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ARPC3O15145 178 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 DCXO43602 365 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF182P17025 639 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ECI1P42126 302 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PTH2RP49190 550 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GNG10P50151 68 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GRB2P62993 217 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 RBMS2Q15434 407 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 LTB4RQ15722 352 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 INAVAQ3KP66 663 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 NADK2Q4G0N4 442 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 HGSNATQ68CP4 663 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ADAMTSL2Q86TH1 951 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TGIF2LYQ8IUE0 185 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 GABRG1Q8N1C3 465 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TTC9Q92623 222 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 OSTF1Q92882 214 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 MARC2Q969Z3 335 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 XAGE2Q96GT9 111 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 TRMOQ9BU70 441 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 PRDM12Q9H4Q4 367 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 NARFLQ9H6Q4 476 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ZNF160Q9HCG1 818 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ARL8BQ9NVJ2 186 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 KIAA1024Q9UPX6 916 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 ACTL7AQ9Y615 435 aa5.81□□□□□ -1.48
CDC42BPA-201ENST00000334218 NEXMIFQ5QGS0 1516 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 A0A1W2PPM1 405 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 RBAK-RBAKDNI3L0D1 243 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 CYB5BO43169 146 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 LIPFP07098 398 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 LINGO3P0C6S8 592 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 AKR1C4P17516 323 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 RFC2P35250 354 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 PDX1P52945 283 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 TAS2R19P59542 299 aa5.8□□□□□ -1.48
CDC42BPA-201ENST00000334218 SRYQ05066 204 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms