RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	TMEM64	Q6YI46	380 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	RASGRP3	Q8IV61	690 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	SLC30A8	Q8IWU4	369 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	OR5T3	Q8NGG3	340 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	COG8	Q96MW5	612 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	ASPN	Q9BXN1	380 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	ACTL8	Q9H568	366 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	MAGIX	Q9H6Y5	334 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	SRA1	Q9HD15	236 aa	Known RBP	11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	YBX2	Q9Y2T7	364 aa	Known RBP	11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	PCDHGA2	Q9Y5H1	932 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	PARP14	Q460N5	1801 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	C17orf113	A0A1B0GUU1	675 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	GAPDHS	O14556	408 aa	Predicted RBP	11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	TMPRSS11D	O60235	418 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	HOXA9	P31269	272 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	PCGF2	P35227	344 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	ACVR1B	P36896	505 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	DCDC1	P59894	354 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	DUSP6	Q16828	381 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	TMEM196	Q5HYL7	178 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	C22orf42	Q6IC83	251 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	MZT2A	Q6P582	158 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	GJD3	Q8N144	294 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	OR2L3	Q8NG85	312 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	SUN3	Q8TAQ9	357 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	CREB3L4	Q8TEY5	395 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	RIT1	Q92963	219 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	NKD1	Q969G9	470 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	ZNF707	Q96C28	371 aa	Predicted RBP	11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	ERMAP	Q96PL5	475 aa	Predicted RBP	11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	CDADC1	Q9BWV3	514 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	LYAR	Q9NX58	379 aa	Known RBP	11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	TAAR2	Q9P1P5	351 aa		11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	SPTAN1	Q13813	2472 aa	Known RBP	11.17	□□□□□ -0.62
DDR1-223	ENST00000324771	SCD	O00767	359 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	UBXN7	O94888	489 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	HMGN1	P05114	100 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	GYPB	P06028	91 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	PROS1	P07225	676 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	RNH1	P13489	461 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	GNS	P15586	552 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	CXCR1	P25024	350 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	EMX1	Q04741	257 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	MICA	Q29983	383 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	METTL2B	Q6P1Q9	378 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	SLC22A16	Q86VW1	577 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	OR8J2	Q8NGG1	315 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	ALKBH4	Q9NXW9	302 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	GPN3	Q9UHW5	284 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	MRTO4	Q9UKD2	239 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771		H0YJX3	145 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	KLK8	O60259	260 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	CDC40	O60508	579 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	CLEC3A	O75596	197 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	HPR	P00739	348 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	HOXD12	P35452	270 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	BCL6	P41182	706 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	SOX2	P48431	317 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	SPHAR	Q15513	63 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	OR5M10	Q6IEU7	315 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	BBS10	Q8TAM1	723 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	NDNF	Q8TB73	568 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	UBTD2	Q8WUN7	234 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	FCGR1B	Q92637	280 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	TM4SF18	Q96CE8	201 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	TMEM80	Q96HE8	168 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	SAMD8	Q96LT4	415 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	NECTIN4	Q96NY8	510 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	NIPSNAP1	Q9BPW8	284 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	MS4A8	Q9BY19	250 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	ALOXE3	Q9BYJ1	711 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	OR51E2	Q9H255	320 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	PELI2	Q9HAT8	420 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	KIF13B	Q9NQT8	1826 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	OPN1LW	P04000	364 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	CRHBP	P24387	322 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	OPRD1	P41143	372 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	SOX3	P41225	446 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	TPMT	P51580	245 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	ADPRH	P54922	357 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	OC90	Q02509	493 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	NSDHL	Q15738	373 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	DECR1	Q16698	335 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	METRNL	Q641Q3	311 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	PLBD1	Q6P4A8	553 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	USP43	Q70EL4	1123 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	OR4K13	Q8NH42	304 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	CHTF18	Q8WVB6	975 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	MRPL38	Q96DV4	380 aa	Known RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	CCDC115	Q96NT0	180 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	TRIM2	Q9C040	744 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	GLIPR2	Q9H4G4	154 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	AREL1	O15033	823 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	IDH3B	O43837	385 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	IGFBP1	P08833	259 aa	Predicted RBP	11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	GSTM3	P21266	225 aa		11.16	□□□□□ -0.62
DDR1-223	ENST00000324771	ATP5A1	P25705	553 aa	Known RBP	11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms