RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 CD1CP29017 333 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 GSTT1P30711 240 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 LCN1P31025 176 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 GSSP48637 474 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 XKP51811 444 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 DLX5P56178 289 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 HSD17B7P56937 341 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 SMIM11AP58511 58 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 RPS26P62854 115 aaKnown RBP6.7□□□□□ -1.34
NPHP1-201ENST00000316534 CDK5Q00535 292 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 RPL6Q02878 288 aaKnown RBP6.7□□□□□ -1.34
NPHP1-201ENST00000316534 COX10Q12887 443 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 UBXN2BQ14CS0 331 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 ZNF141Q15928 474 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 ZNF528Q3MIS6 628 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 RD3Q7Z3Z2 195 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 ADCK2Q7Z695 626 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 SHISA5Q8N114 240 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 SLC5A8Q8N695 610 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 CDRT4Q8N9R6 151 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 FLCNQ8NFG4 579 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 OR10G2Q8NGC3 310 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 OR5D16Q8NGK9 328 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 OR10Q1Q8NGQ4 319 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 IPCEF1Q8WWN9 437 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-201ENST00000316534 NTNG2Q96CW9 530 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 VSTM2LQ96N03 204 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 OR1F2PQ96R84 312 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 BBS4Q96RK4 519 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 NIPSNAP1Q9BPW8 284 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 JAM3Q9BX67 310 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 MTHFD2LQ9H903 347 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-201ENST00000316534 TIMMDC1Q9NPL8 285 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 RLIMQ9NVW2 624 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 ZNF223Q9UK11 482 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-201ENST00000316534 SIT1Q9Y3P8 196 aa6.7□□□□□ -1.34
NPHP1-201ENST00000316534 A0A0J9YVX5 310 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 PCDH17O14917 1159 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 BRINP1O60477 761 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 FZD7O75084 574 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 CT62P0C5K7 136 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 CDK4P11802 303 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 PVRP15151 417 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 ELK4P28324 431 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 TLX1P31314 330 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 ALDH9A1P49189 494 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 ARHGDIAP52565 204 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 PLCL1Q15111 1095 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 LTB4RQ15722 352 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 SYT6Q5T7P8 510 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 PRPF38BQ5VTL8 546 aaKnown RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 TTC33Q6PID6 262 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 DGAT2L6Q6ZPD8 337 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 TTC29Q8NA56 475 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 YIPF6Q96EC8 236 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 SDF2Q99470 211 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 GPN2Q9H9Y4 310 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 NMNAT1Q9HAN9 279 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 UCKL1Q9NWZ5 548 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 KCNE5Q9UJ90 142 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 RNF6Q9Y252 685 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 MMACHCQ9Y4U1 282 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 IGHV5-51A0A0C4DH38 117 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 A0A1B0GTQ1 180 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 HYKKA2RU49 373 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 SH3D21A4FU49 640 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 BCAT2O15382 392 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 B4GAT1O43505 415 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 HS6ST1O60243 411 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 PCDHGA12O60330 932 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 ZBTB11O95625 1053 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 CLIC3O95833 236 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 EPHA2P29317 976 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 CSF2RBP32927 897 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 SOAT1P35610 550 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 EMDP50402 254 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 GAS1P54826 345 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 TMBIM6P55061 237 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 DECR1Q16698 335 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 NDUFA9Q16795 377 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 FAM214AQ32MH5 1076 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 OTUD3Q5T2D3 398 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 FAM180BQ6P0A1 224 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 QSOX2Q6ZRP7 698 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 LINC00299Q6ZSB3 139 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 SAP25Q8TEE9 199 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 HSPA12BQ96MM6 686 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 FEVQ99581 238 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 PELOQ9BRX2 385 aaKnown RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 CXorf21Q9HAI6 301 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 KRT84Q9NSB2 600 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 PSORS1C1Q9UIG5 152 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 ZNF443Q9Y2A4 671 aaPredicted RBP6.69□□□□□ -1.34
NPHP1-201ENST00000316534 A0A0G2JN53 185 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 TRBV4-1A0A0J9YWV2 114 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 ADAM10O14672 748 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 CCNB2O95067 398 aa6.69□□□□□ -1.34
NPHP1-201ENST00000316534 OR5F1O95221 314 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms