RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 GPR17Q13304 367 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 KEAP1Q14145 624 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 OPCMLQ14982 345 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 P2RY6Q15077 328 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 PPP1R7Q15435 360 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 ZBTB6Q15916 424 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 C2CD6Q53TS8 623 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 ALKAL1Q6UXT8 129 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 UNC93AQ86WB7 457 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 KATNAL2Q8IYT4 538 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 NAGSQ8N159 534 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 MREGQ8N565 214 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 POC1AQ8NBT0 407 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 LGALS12Q96DT0 336 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 TSPYL1Q9H0U9 437 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 C1orf21Q9H246 121 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 UBQLN3Q9H347 655 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 ZCCHC3Q9NUD5 404 aaKnown RBP3.59□□□□□ -1.83
SMCO3-201ENST00000316048 MTRF1LQ9UGC7 380 aaKnown RBP3.59□□□□□ -1.83
SMCO3-201ENST00000316048 PIN4Q9Y237 131 aaKnown RBP3.59□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF510Q9Y2H8 683 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 TRPM7Q96QT4 1865 aa3.59□□□□□ -1.83
SMCO3-201ENST00000316048 SMIM28A0A1B0GU29 152 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 C2orf92A0A1B0GVN3 265 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 ZSCAN5CA6NGD5 496 aaPredicted RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 SLC9B1P1A6NJY1 282 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 NPIPA3F8WFD2 350 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 GOLGA8SH3BPF8 625 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 NDC80O14777 642 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 HUS1O60921 280 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 CPA3P15088 417 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 KCNE1P15382 129 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 PSMA2P25787 234 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 HSPA9P38646 679 aaKnown RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 MARCKSL1P49006 195 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 NR0B1P51843 470 aaKnown RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 NDST1P52848 882 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 GSCP56915 257 aaPredicted RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 SRP54P61011 504 aaKnown RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 MRPS6P82932 125 aaKnown RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 CAV1Q03135 178 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 CDH18Q13634 790 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 GK2Q14410 553 aaPredicted RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 DUPD1Q68J44 220 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 ZNF324BQ6AW86 544 aaPredicted RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 TWF2Q6IBS0 349 aaKnown RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 LCLAT1Q6UWP7 414 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 CROCCP2Q86T23 111 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 PIGZQ86VD9 579 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 IQCKQ8N0W5 287 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 NIPA2Q8N8Q9 360 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 PRELID2Q8N945 189 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 BBOF1Q8ND07 529 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 CCNYQ8ND76 341 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 OR4C15Q8NGM1 316 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 VOPP1Q96AW1 172 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 SCRN2Q96FV2 425 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 MCEEQ96PE7 176 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 FMO2Q99518 471 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 ELOVL4Q9GZR5 314 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 DPH5Q9H2P9 285 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 SMYD3Q9H7B4 428 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 COMMD8Q9NX08 183 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 SPASTQ9UBP0 616 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 NCKAP1Q9Y2A7 1128 aa3.59□□□□□ -1.84
SMCO3-201ENST00000316048 MTF2Q9Y483 593 aaPredicted RBP3.59□□□□□ -1.84
SMCO3-201ENST00000316048 TMEM129A0AVI4 362 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 A8MXQ7 604 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 KPNA7A9QM74 516 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 F8VP50 259 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 M0QYV0 167 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 O00370 1275 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 PIRO00625 290 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 CABYRO75952 493 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 RALAP11233 206 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 GP1BBP13224 206 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 CYBAP13498 195 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 CEACAM8P31997 349 aaPredicted RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 RDXP35241 583 aaKnown RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 GLIPR1P48060 266 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TAF6P49848 677 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ATXN3P54252 364 aaPredicted RBP3.58□□□□□ -1.84
SMCO3-201ENST00000316048 PLTPP55058 493 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SLC8A3P57103 927 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SP3Q02447 781 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 LCP2Q13094 533 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 SNX1Q13596 522 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TRADDQ15628 312 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 XKR4Q5GH76 650 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TFDP3Q5H9I0 405 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 PRAMEF7Q5VXH5 474 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 OR6B2Q6IFH4 312 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TMEM207Q6UWW9 146 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 CXCL17Q6UXB2 119 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 MFSD7Q6UXD7 560 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 C9orf139Q6ZV77 190 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 ZDHHC17Q8IUH5 632 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 STHQ8IWL8 128 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 THEM5Q8N1Q8 247 aa3.58□□□□□ -1.84
SMCO3-201ENST00000316048 TRPV1Q8NER1 839 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms