RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CDS1Q92903 461 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 NT5DC2Q9H857 520 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 SLC17A4Q9Y2C5 497 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 TRIM3O75382 744 aaPredicted RBP12.89□□□□□ -0.35
DDX54-202ENST00000314045 PRKRAO75569 313 aaKnown RBP12.89□□□□□ -0.35
DDX54-202ENST00000314045 ADAP00813 363 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 MAT1AQ00266 395 aaKnown RBP12.89□□□□□ -0.35
DDX54-202ENST00000314045 TNFRSF17Q02223 184 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 C14orf28Q4W4Y0 310 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 ALG10BQ5I7T1 473 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 ADNP2Q6IQ32 1131 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 POC5Q8NA72 575 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 OR2T33Q8NG76 320 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 OR52R1Q8NGF1 315 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 MAFAQ8NHW3 353 aaPredicted RBP12.89□□□□□ -0.35
DDX54-202ENST00000314045 ZFP90Q8TF47 636 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 DNAJA3Q96EY1 480 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 MARCH7Q9H992 704 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 ICKQ9UPZ9 632 aa12.89□□□□□ -0.35
DDX54-202ENST00000314045 TRAPPC13A5PLN9 417 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 TLCD2A6NGC4 264 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 DENRO43583 198 aaKnown RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 PPM1BO75688 479 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 HK1P19367 917 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 GPR143P51810 404 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 PLGLB1Q02325 96 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 ST3GAL4Q11206 333 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 ZNF846Q147U1 533 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 CCNJQ5T5M9 372 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 TLDC1Q6P9B6 456 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 CXorf36Q9H7Y0 433 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 PTTG2Q9NZH5 202 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 PCDHGB1Q9Y5G3 927 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 NPIPA5A0A0B4J1W7 369 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 C2orf92A0A1B0GVN3 265 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 NPIPA7E9PJI5 369 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 NPIPA8P0DM63 369 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 GPR4P46093 362 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 RGS21Q2M5E4 152 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 PYDC2Q56P42 97 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 NKAIN2Q5VXU1 208 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 FAM111BQ6SJ93 734 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 PPP1R3BQ86XI6 285 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 KLHDC8BQ8IXV7 354 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 ZNF440Q8IYI8 595 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 FANK1Q8TC84 345 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 SFXN5Q8TD22 340 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 TMEM203Q969S6 136 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 TMCO6Q96DC7 493 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 OR4K3Q96R72 315 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 OR7D2Q96RA2 312 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 TREX2Q9BQ50 279 aaPredicted RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 KCNN2Q9H2S1 579 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 GALNT8Q9NY28 637 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 MAGED1Q9Y5V3 778 aaPredicted RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 PGCP20142 388 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 FUT4P22083 530 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 HSD11B2P80365 405 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 FAM69BQ5VUD6 431 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 MEDAGQ5VYS4 303 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 LAS2Q8IYD9 372 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 OR9Q2Q8NGE9 314 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 TSEN15Q8WW01 171 aaKnown RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 ERMAPQ96PL5 475 aaPredicted RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 HOXD1Q9GZZ0 328 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 WSB2Q9NYS7 404 aaPredicted RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 MTCH2Q9Y6C9 303 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 AKAP8O43823 692 aaKnown RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 OTX2P32243 289 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 CBLBQ13191 982 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 TMEM92Q6UXU6 159 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 NRMQ8IXM6 262 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 SLC22A8Q8TCC7 542 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 CMKLR1Q99788 373 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 GLIPR2Q9H4G4 154 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 CENPMQ9NSP4 180 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 PPP4R1LQ9P1A2 415 aa12.88□□□□□ -0.35
DDX54-202ENST00000314045 DHCR7Q9UBM7 475 aaKnown RBP12.88□□□□□ -0.35
DDX54-202ENST00000314045 YY2O15391 372 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 COL9A1P20849 921 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 GBX2P52951 348 aaPredicted RBP12.87□□□□□ -0.35
DDX54-202ENST00000314045 RAB38P57729 211 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 CNPY1Q3B7I2 92 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 OR51Q1Q8NH59 317 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 PINK1Q9BXM7 581 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 TUBA8Q9NY65 449 aaPredicted RBP12.87□□□□□ -0.35
DDX54-202ENST00000314045 CKLFQ9UBR5 152 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 PPT2Q9UMR5 302 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 NPIPA5E9PKD4 350 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 ACOT8O14734 319 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 CASC3O15234 703 aaKnown RBP12.87□□□□□ -0.35
DDX54-202ENST00000314045 INMTO95050 263 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 PIGFQ07326 219 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 BTBD16Q32M84 506 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 NDUFAF6Q330K2 333 aa12.87□□□□□ -0.35
DDX54-202ENST00000314045 ARL9Q6T311 187 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms