RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 H7C1Q1 480 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NT5EP21589 574 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PRKAR1BP31321 381 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 MTNR1BP49286 362 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 UBE2MP61081 183 aaKnown RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GK2Q14410 553 aaPredicted RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 KDM4DQ6B0I6 523 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GKN2Q86XP6 184 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ARMC10Q8N2F6 343 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 OR52J3Q8NH60 311 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SMOQ99835 787 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 TLR9Q9NR96 1032 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NPIPA1Q9UND3 350 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 HBE1P02100 147 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SLC3A1Q07837 685 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 HNRNPA0Q13151 305 aaKnown RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 FAM117BQ6P1L5 589 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 IDO2Q6ZQW0 420 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 BEST3Q8N1M1 668 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 DTWD1Q8N5C7 304 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 HOXB13Q92826 284 aaPredicted RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 LHPPQ9H008 270 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PIGMQ9H3S5 423 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GALPQ9UBC7 116 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PCYT1BQ9Y5K3 369 aaPredicted RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 KMT2EQ8IZD2 1858 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 FAM230AA0A1W2PPH8 454 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 KRBA1A5PL33 1030 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 C9J4A7 227 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 TNFP01375 233 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SPINT3P49223 89 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ACVR1Q04771 509 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ALG1LQ6GMV1 187 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NXPE4Q6UWF7 544 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GSG1LQ6UXU4 331 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ING5Q8WYH8 240 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 SLC35C2Q9NQQ7 365 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GDE1Q9NZC3 331 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 AJAP1Q9UKB5 411 aaPredicted RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GPSM3Q9Y4H4 160 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GAPDHSO14556 408 aaPredicted RBP8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ADAM12O43184 909 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 RAB3BP20337 219 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 RAB5CP51148 216 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GLO1Q04760 184 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 UAP1L1Q3KQV9 507 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 ENPP7Q6UWV6 458 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 CBLL1Q75N03 491 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 B3GNT7Q8NFL0 401 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NETO1Q8TDF5 533 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 GABARAPL3Q9BY60 117 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PCDHB14Q9Y5E9 798 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 CLCA3PQ9Y6N3 262 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 VWA8A3KMH1 1905 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 FTCDNL1E5RQL4 147 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 BPNT1O95861 308 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 C21orf58P58505 322 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 RAB11BQ15907 218 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 PYROXD2Q8N2H3 581 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 TERB2Q8NHR7 220 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NFKBIDQ8NI38 313 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 THAP4Q8WY91 577 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 NEURL3Q96EH8 262 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 CDK15Q96Q40 435 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 TMEM131Q92545 1883 aa8.39□□□□□ -1.07
COL6A5-202ENST00000312481 BCAS1O75363 584 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 NCK1P16333 377 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 ITGB7P26010 798 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 DAP3P51398 398 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 RAB31Q13636 194 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CCDC86Q9H6F5 360 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 APMAPQ9HDC9 416 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 EXTL2Q9UBQ6 330 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 PSAT1Q9Y617 370 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TSPAN3O60637 253 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 FARS2O95363 451 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF26P17031 533 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 AQP1P29972 269 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 KIAA0907Q7Z7F0 614 aaPredicted RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 COMMD1Q8N668 190 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 ZFP3Q96NJ6 502 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TSNAXQ99598 290 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 METTL8Q9H825 291 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 A4GALTQ9NPC4 353 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 DNAJC25-GNG10A0A024R161 153 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 C5orf51A6NDU8 294 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 UBFD1O14562 309 aaKnown RBP8.38□□□□□ -1.07
COL6A5-202ENST00000312481 DIRAS3O95661 229 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 BCHEP06276 602 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 CCR7P32248 378 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 HK3P52790 923 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TAS2R38P59533 333 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 ZNF460Q14592 562 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 PPA1Q15181 289 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 NTRK2Q16620 822 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 TREML2Q5T2D2 321 aa8.38□□□□□ -1.07
COL6A5-202ENST00000312481 DUS1LQ6P1R4 473 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms