RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 B4GALT7Q9UBV7 327 aa14.94□□□□□ -0.02
LSM1-201ENST00000311351 DNAJC15Q9Y5T4 150 aa14.94□□□□□ -0.02
LSM1-201ENST00000311351 OR14I1A6ND48 311 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 FRG2CA6NGY1 282 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 C19orf84I3L1E1 186 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 GNB5O14775 395 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 BCKDKO14874 412 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 ACOX3O15254 700 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 RGS14O43566 566 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 TYROBPO43914 113 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 SUSD5O60279 629 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 NPHS1O60500 1241 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 HCN1O60741 890 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 TUBBP07437 444 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 SNRPB2P08579 225 aaKnown RBP14.93□□□□□ -0.02
LSM1-201ENST00000311351 NEFHP12036 1026 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 AGAP20933 346 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 DRD5P21918 477 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 MC3RP41968 323 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 MASP1P48740 699 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 NUP107P57740 925 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 RPL38P63173 70 aaKnown RBP14.93□□□□□ -0.02
LSM1-201ENST00000311351 TMEM198Q66K66 360 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 ANKRD26P1Q6NSI1 321 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 TMEM107Q6UX40 140 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 IKBIPQ70UQ0 350 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 DDIASQ8IXT1 998 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 SLC34A3Q8N130 599 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 CLHC1Q8NHS4 586 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 TWIST2Q8WVJ9 160 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 TMBIM1Q969X1 311 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 FCRL1Q96LA6 429 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 BTBD9Q96Q07 612 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 TMEM109Q9BVC6 243 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 FOLH1BQ9HBA9 442 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 GALNT9Q9HCQ5 603 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 GIMAP2Q9UG22 337 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 GPR55Q9Y2T6 319 aaPredicted RBP14.93□□□□□ -0.02
LSM1-201ENST00000311351 ARHGAP21Q5T5U3 1957 aa14.93□□□□□ -0.02
LSM1-201ENST00000311351 LRBAP50851 2863 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 C2orf72A6NCS6 295 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 NPIPB8E9PQR5 432 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 PIP5K1BO14986 540 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 LSM1O15116 133 aaKnown RBP14.92□□□□□ -0.02
LSM1-201ENST00000311351 TO15178 435 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 HNRNPRO43390 633 aaKnown RBP14.92□□□□□ -0.02
LSM1-201ENST00000311351 PLOD3O60568 738 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 ERN1O75460 977 aaKnown RBP14.92□□□□□ -0.02
LSM1-201ENST00000311351 BCAS2O75934 225 aaPredicted RBP14.92□□□□□ -0.02
LSM1-201ENST00000311351 CHEK2O96017 543 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 CT45A8P0DMV1 189 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 CT45A9P0DMV2 189 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 PRF1P14222 555 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 NAGAP17050 411 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 SDC1P18827 310 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 ACVR2AP27037 513 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 NTSP30990 170 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 MPIP34949 423 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 PTGDSP41222 190 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 DCAF7P61962 342 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 RPP38P78345 283 aaKnown RBP14.92□□□□□ -0.02
LSM1-201ENST00000311351 ZNF155Q12901 538 aaPredicted RBP14.92□□□□□ -0.02
LSM1-201ENST00000311351 GALNTL6Q49A17 601 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 ZNF385BQ569K4 471 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 CT45A2Q5DJT8 189 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 SH2D4BQ5SQS7 431 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 RNF165Q6ZSG1 346 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 NEIL3Q8TAT5 605 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 NTNG2Q96CW9 530 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 ERP27Q96DN0 273 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 PKNOX2Q96KN3 472 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 AMDHD1Q96NU7 426 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 GNRHR2Q96P88 292 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 TSSK3Q96PN8 268 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 CCT7Q99832 543 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 OSBPL11Q9BXB4 747 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 GLIPR2Q9H4G4 154 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 QPCTLQ9NXS2 382 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 ACAD8Q9UKU7 415 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 RAB21Q9UL25 225 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 RNF6Q9Y252 685 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 C15orf41Q9Y2V0 281 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 FAM215AQ9Y5M1 114 aa14.92□□□□□ -0.02
LSM1-201ENST00000311351 ADGRG4Q8IZF6 3080 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 PRAMEF25A6NGN4 478 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 FIGNL2A6NMB9 653 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 AKAP10O43572 662 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 REM1O75628 298 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 SNX4O95219 450 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 BPGMP07738 259 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 ETV4P43268 484 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 UGT3A2Q3SY77 523 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 RFTN2Q52LD8 501 aaPredicted RBP14.91□□□□□ -0.02
LSM1-201ENST00000311351 RTL6Q6ICC9 239 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 ANGPTL8Q6UXH0 198 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 NUP54Q7Z3B4 507 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 PACS2Q86VP3 889 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 CCDC71Q8IV32 467 aaPredicted RBP14.91□□□□□ -0.02
LSM1-201ENST00000311351 LIX1Q8N485 282 aa14.91□□□□□ -0.02
LSM1-201ENST00000311351 OR4N2Q8NGD1 307 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms