RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 EIF2B2P49770 351 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 PPP5CP53041 499 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 DLX2Q07687 328 aaPredicted RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 INAVAQ3KP66 663 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 SLX4IPQ5VYV7 408 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 USP30Q70CQ3 517 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 SFTPA2Q8IWL1 248 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 C9orf43Q8TAL5 461 aaPredicted RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 BBS10Q8TAM1 723 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 TMEM80Q96HE8 168 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 MROQ9BYG7 248 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 SACM1LQ9NTJ5 587 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 TAS2R7Q9NYW3 318 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 EHD3Q9NZN3 535 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 SNX7Q9UNH6 387 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 RPL36Q9Y3U8 105 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 A0A0C4DFX4 3053 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 AGAP5A6NIR3 686 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 LRRTM2O43300 516 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 PLRG1O43660 514 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 GPX5O75715 221 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 OXSR1O95747 527 aaPredicted RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 F3P13726 295 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 GPR4P46093 362 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 GIPRP48546 466 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 RGS1Q08116 209 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 C1DQ13901 141 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 GPR68Q15743 365 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 SSX1Q16384 188 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 SPANXN2Q5MJ10 180 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 PLEKHG7Q6ZR37 379 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ZNF614Q8N883 585 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 SRFBP1Q8NEF9 429 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 OR56A1Q8NGH5 318 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 OR9Q1Q8NGQ5 310 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 TEX47Q8TBZ9 253 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 HPS1Q92902 700 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 NACC2Q96BF6 587 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ELP4Q96EB1 424 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 NEURL2Q9BR09 285 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 PITHD1Q9GZP4 211 aaPredicted RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 C14orf119Q9NWQ9 140 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 QPCTLQ9NXS2 382 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 SPTBP11277 2137 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 A0A087WUU8 490 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 LRRC72A6NJI9 287 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 A8MVJ9 347 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 EMC8O43402 210 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 TBX19O60806 448 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ADAM23O75077 832 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 CSO75390 466 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 MED26O95402 600 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ATP6V1E1P36543 226 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 EIF2DP41214 584 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 PCYT1AP49585 367 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 TRA2BP62995 288 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ABATP80404 500 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 TIMM50Q3ZCQ8 353 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 OR2G6Q5TZ20 316 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 TYW3Q6IPR3 259 aaKnown RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 FAM111BQ6SJ93 734 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 PLEKHM3Q6ZWE6 761 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ZFP41Q8N8Y5 198 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ASPNQ9BXN1 380 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 DZANK1Q9NVP4 752 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ZNF624Q9P2J8 865 aaPredicted RBP10.85□□□□□ -0.67
PTPN2-201ENST00000309660 CLCA2Q9UQC9 943 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 NCKAP1Q9Y2A7 1128 aa10.85□□□□□ -0.67
PTPN2-201ENST00000309660 ARHGEF17Q96PE2 2063 aaPredicted RBP10.84□□□□□ -0.67
PTPN2-201ENST00000309660 NUP210Q8TEM1 1887 aaPredicted RBP10.84□□□□□ -0.67
PTPN2-201ENST00000309660 OR6C74A6NCV1 312 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 LDB3O75112 727 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 LGI1O95970 557 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 PSMA1P25786 263 aaKnown RBP10.84□□□□□ -0.67
PTPN2-201ENST00000309660 AHRP35869 848 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 PDX1P52945 283 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 ZIC1Q15915 447 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 SLC30A6Q6NXT4 461 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 ASPGQ86U10 573 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 OR8H2Q8N162 312 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 CDS1Q92903 461 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 OPALINQ96PE5 141 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 CDCA4Q9BXL8 241 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 CACYBPQ9HB71 228 aaKnown RBP10.84□□□□□ -0.67
PTPN2-201ENST00000309660 MAN2C1Q9NTJ4 1040 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 CHCHD3Q9NX63 227 aaKnown RBP10.84□□□□□ -0.67
PTPN2-201ENST00000309660 ERVK13-1Q9NX77 482 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 KLHL28Q9NXS3 571 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 CNOT2Q9NZN8 540 aaKnown RBP10.84□□□□□ -0.67
PTPN2-201ENST00000309660 NPIPA5A0A0B4J1W7 369 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 A0A1W2PRQ8 180 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 NPIPA7E9PJI5 369 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 PROM1O43490 865 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 NPIPA8P0DM63 369 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 IFNA8P32881 189 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 CSTF2P33240 577 aaKnown RBP eCLIP10.84□□□□□ -0.67
PTPN2-201ENST00000309660 DAB2P98082 770 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 GNA13Q14344 377 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 STEAP3Q658P3 488 aa10.84□□□□□ -0.67
PTPN2-201ENST00000309660 VN1R4Q7Z5H5 301 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms