RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 NDUFAF1Q9Y375 327 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 SCN2AQ99250 2005 aa16.56■□□□□ 0.24
SSSCA1-201ENST00000309328 RNF103-CHMP3A0A140T963 221 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 DCTN3O75935 186 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 ANP32DO95626 131 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 CPSF4O95639 269 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 KRT75O95678 551 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 WDPCPO95876 746 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 FBXO45P0C2W1 286 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 EFNA1P20827 205 aaPredicted RBP16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 PPIBP23284 216 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 PTGER1P34995 402 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 KRT20P35900 424 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 NR0B1P51843 470 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 OC90Q02509 493 aaPredicted RBP16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 DUSP8Q13202 625 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 TUBA3CQ13748 450 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 C6orf10Q5SRN2 563 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 FCRLBQ6BAA4 426 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 MFSD12Q6NUT3 480 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 TUBA3EQ6PEY2 450 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 ANKRD46Q86W74 232 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 SLC34A3Q8N130 599 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 EXD3Q8N9H8 876 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 GOLM1Q8NBJ4 401 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 DOK4Q8TEW6 326 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 SPACA9Q96E40 222 aaPredicted RBP16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 NEURL3Q96EH8 262 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 SECISBP2Q96T21 854 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 NMUR2Q9GZQ4 415 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 RAD21L1Q9H4I0 556 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 OR10H1Q9Y4A9 318 aa16.55■□□□□ 0.24
SSSCA1-201ENST00000309328 NBEAQ8NFP9 2946 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 A0A096LPI6 279 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 C9JVG2 144 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 TP53I11O14683 189 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 ASNA1O43681 348 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 KCNH1O95259 989 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 AK1P00568 194 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 NPPAP01160 153 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 HMGN2P05204 90 aaKnown RBP16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 ALOX5P09917 674 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CT45A8P0DMV1 189 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CT45A9P0DMV2 189 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CD46P15529 392 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CHI3L1P36222 383 aaPredicted RBP16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 TNFSF10P50591 281 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 PRKAG1P54619 331 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 KLRB1Q12918 225 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 KLF10Q13118 480 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 STX5Q13190 355 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 INAQ16352 499 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CT45A2Q5DJT8 189 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CDC73Q6P1J9 531 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 RTL4Q6ZR62 310 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 Q6ZS92 163 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 ZNF621Q6ZSS3 439 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CYP4Z2PQ8N1L4 340 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 DPP10Q8N608 796 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 MIPOL1Q8TD10 442 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 NUDT8Q8WV74 236 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 GTF2H4Q92759 462 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 PNPLA2Q96AD5 504 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 VPS33AQ96AX1 596 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 GIMAP5Q96F15 307 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 C5orf34Q96MH7 638 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 SLC35A5Q9BS91 424 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 NXF5Q9H1B4 397 aaKnown RBP16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 HHATLQ9HCP6 504 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 TIMMDC1Q9NPL8 285 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 SERHLQ9NQF3 203 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 THUMPD1Q9NXG2 353 aaKnown RBP16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 LRFN1Q9P244 771 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 CORO2BQ9UQ03 480 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 ERVK-11Q9UQG0 969 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 B3GNT3Q9Y2A9 372 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 NPFFR2Q9Y5X5 522 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 MED13Q9UHV7 2174 aa16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 KMT2BQ9UMN6 2715 aaPredicted RBP16.54■□□□□ 0.24
SSSCA1-201ENST00000309328 NKX2-2O95096 273 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 ABCD3P28288 659 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 LCN1P31025 176 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 CD96P40200 585 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 MAP3K8P41279 467 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 PSG6Q00889 435 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 PLCXD2Q0VAA5 305 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 LASP1Q14847 261 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 OR1C1Q15619 314 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 NTRK2Q16620 822 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 DECR1Q16698 335 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 LRIF1Q5T3J3 769 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 C6orf120Q7Z4R8 191 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 MTDHQ86UE4 582 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 SLC44A2Q8IWA5 706 aaPredicted RBP16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 TEX19Q8NA77 164 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 TMEM178AQ8NBL3 297 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 SLC35G5Q96KT7 338 aa16.53■□□□□ 0.24
SSSCA1-201ENST00000309328 ANKRA2Q9H9E1 313 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms