RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ACTR5Q9H9F9 607 aaPredicted RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 KCNK9Q9NPC2 374 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 STARD5Q9NSY2 213 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 CNIH4Q9P003 139 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 TRAF6Q9Y4K3 522 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 PCDHA9Q9Y5H5 950 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 LYVE1Q9Y5Y7 322 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 SCN3AQ9NY46 2000 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 C1QTNF9BB2RNN3 333 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 H3BQF6 201 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 UBFD1O14562 309 aaKnown RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 HCRTR2O43614 444 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 TLX3O43711 291 aaPredicted RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 CRCPO75575 148 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 MED26O95402 600 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 IGHEP01854 428 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 EIF2S1P05198 315 aaKnown RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 ITGA5P08648 1049 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 SLC35G6P0C7Q6 338 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 C1QTNF9P0C862 333 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 LIPCP11150 499 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 SERPINB1P30740 379 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 NPY4RP50391 375 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 PKNOX1P55347 436 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 WDR4P57081 412 aaKnown RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 PCBP4P57723 403 aaKnown RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 RAB14P61106 215 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 RPS3AP61247 264 aaKnown RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 ROR2Q01974 943 aaKnown RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 CLN3Q13286 438 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 ADPRMQ3LIE5 342 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 ATAD3BQ5T9A4 648 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 GKAP1Q5VSY0 366 aaPredicted RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 TMEM214Q6NUQ4 689 aaKnown RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 LETMD1Q6P1Q0 360 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 MED27Q6P2C8 311 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 CYP20A1Q6UW02 462 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 VN1R5Q7Z5H4 357 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 ZFAND4Q86XD8 727 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.74□□□□□ -1.173e-6■■□□□ 12.7
CHD6-201ENST00000309279 ELMOD2Q8IZ81 293 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 DSELQ8IZU8 1212 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 NLGN4XQ8N0W4 816 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 TTC29Q8NA56 475 aaPredicted RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 NLGN4YQ8NFZ3 816 aaPredicted RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 OR7G3Q8NG95 312 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 OR4F6Q8NGB9 312 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 WDR20Q8TBZ3 569 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 CPT1CQ8TCG5 803 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 PROKR1Q8TCW9 393 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 ZNF473Q8WTR7 871 aaKnown RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 DYDC1Q8WWB3 177 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 C10orf90Q96M02 699 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 CDK15Q96Q40 435 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 TRMOQ9BU70 441 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 MECRQ9BV79 373 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 NLNQ9BYT8 704 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 SLC6A16Q9GZN6 736 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 EXO5Q9H790 373 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 ACSS2Q9NR19 701 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 CUTCQ9NTM9 273 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 TMEM140Q9NV12 185 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 CCDC88CQ9P219 2028 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 PADI1Q9ULC6 663 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 RNF11Q9Y3C5 154 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 BOLA1Q9Y3E2 137 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 GPC6Q9Y625 555 aaPredicted RBP7.74□□□□□ -1.17
CHD6-201ENST00000309279 SLC22A7Q9Y694 548 aa7.74□□□□□ -1.17
CHD6-201ENST00000309279 A0A0A6YYJ9 748 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 TEX51A0A1B0GUA7 166 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 A0A1B0GX78 115 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 SMIM30A4D0T7 59 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 GOLGA8OA6NCC3 632 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 LRIT2A6NDA9 550 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 TMEM8BA6NDV4 472 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 ANKDD1BA6NHY2 528 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 GOLGA8NF8WBI6 632 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 SLCO1B7G3V0H7 640 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 DSCR3O14972 297 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 NDUFS4O43181 175 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 FOXS1O43638 330 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 NPHS1O60500 1241 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 ESRRBO95718 433 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 AK1P00568 194 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 TGFAP01135 160 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 KLK3P07288 261 aaPredicted RBP7.73□□□□□ -1.17
CHD6-201ENST00000309279 SMIM10L1P0DMW3 83 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 UMPSP11172 480 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 TSPAN8P19075 237 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 PTPN6P29350 595 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 SERPINB5P36952 375 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 CAPGP40121 348 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 ABHD18Q0P651 414 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 CDC20Q12834 499 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 PDCD1Q15116 288 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 CPSF6Q16630 551 aaKnown RBP eCLIP7.73□□□□□ -1.17
CHD6-201ENST00000309279 FAM69AQ5T7M9 428 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 ATG16L1Q676U5 607 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 SIGIRRQ6IA17 410 aa7.73□□□□□ -1.17
CHD6-201ENST00000309279 ADNP2Q6IQ32 1131 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms