RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CCDC3Q9BQI4 270 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 THUMPD3Q9BV44 507 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CINPQ9BW66 212 aaPredicted RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 DPY30Q9C005 99 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 AMBRA1Q9C0C7 1298 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 ADNPQ9H2P0 1102 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 KAT8Q9H7Z6 458 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SP140LQ9H930 580 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 MBNL1Q9NR56 388 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 PLCXD1Q9NUJ7 323 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 C1orf109Q9NX04 203 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SCN3BQ9NY72 215 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SELENONQ9NZV5 590 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 WARS2Q9UGM6 360 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 IL36AQ9UHA7 158 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SLC25A13Q9UJS0 675 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 IKZF3Q9UKT9 509 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SAMD4AQ9UPU9 718 aaKnown RBP4.63□□□□□ -1.67
CKS1B-201ENST00000308987 UGT2A1Q9Y4X1 527 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 SPO11Q9Y5K1 396 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CSNK1G3Q9Y6M4 447 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 OTOGQ6ZRI0 2925 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 CNTRLQ7Z7A1 2325 aa4.63□□□□□ -1.67
CKS1B-201ENST00000308987 FBN2P35556 2912 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CCDC187A0A096LP49 1063 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 TRAV20A0A0B4J274 112 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 TRBV5-4A0A0C4DH59 114 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CLEC18AA5D8T8 446 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 FAM90A27PA6NNH2 459 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 C9JVG2 144 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 D6RAR5 112 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 LMO7DNF2Z398 122 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 BOLA2-SMG1P6H3BVE0 249 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 M0R3G1 203 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 MANBAO00462 879 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 BCKDKO14874 412 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 YY2O15391 372 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 NIPSNAP2O75323 286 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ULK1O75385 1050 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ANGPTL1O95841 491 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 NUDT3O95989 172 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 KRT6AP02538 564 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 KRT6BP04259 564 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 RHOCP08134 193 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ALPPL2P10696 532 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SLC2A4P14672 509 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 FPR1P21462 350 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 PPIBP23284 216 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 IGFBP5P24593 272 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 PTX3P26022 381 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 HTR1BP28222 390 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 RBMS1P29558 406 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 HMGCLP35914 325 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 GGT5P36269 586 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OPRL1P41146 370 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CASP2P42575 452 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 YAP1P46937 504 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 RABIFP47224 123 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 KRT6CP48668 564 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CSNK1DP48730 415 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 HTR6P50406 440 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 PPP5CP53041 499 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 C21orf58P58505 322 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 MTPNP58546 118 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 AP1S1P61966 158 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 RPS21P63220 83 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SLC35A2P78381 396 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CCL7P80098 99 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 EMX1Q04741 257 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 LRRC74AQ0VAA2 488 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ITGADQ13349 1161 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 AQP6Q13520 282 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 VEZF1Q14119 521 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 BOP1Q14137 746 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SELPLGQ14242 412 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 GALNT3Q14435 633 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SPCS2Q15005 226 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 HIST2H2ACQ16777 129 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 MEP1AQ16819 746 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CTU2Q2VPK5 515 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ZIK1Q3SY52 487 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 GPR33Q49SQ1 333 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 RFTN2Q52LD8 501 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ZRANB3Q5FWF4 1079 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 TOR1AIP1Q5JTV8 583 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 UBE2UQ5VVX9 321 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 KDM4DQ6B0I6 523 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 LAIR2Q6ISS4 152 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SPESP1Q6UW49 350 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SBSNQ6UWP8 590 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ENPP6Q6UWR7 440 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CLEC18BQ6UXF7 455 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SERPINA11Q86U17 422 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 PARGQ86W56 976 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 MSRB3Q8IXL7 192 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 PIANPQ8IYJ0 282 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CBARPQ8N350 705 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SDR16C5Q8N3Y7 309 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 TMCO5AQ8N6Q1 288 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 DCAF4L2Q8NA75 395 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms