RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 CTSEP14091 401 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 AKT2P31751 481 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 OR1E2P47887 323 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 AVPR1BP47901 424 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 CASP9P55211 416 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ACVR1Q04771 509 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 GANABQ14697 944 aaKnown RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 VMACQ2NL98 169 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ARTNQ5T4W7 220 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ADCK2Q7Z695 626 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 KLHDC8BQ8IXV7 354 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 OR4M1Q8NGD0 313 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 OR6M1Q8NGM8 313 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ZNF514Q96K75 400 aaPredicted RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 LYSMD1Q96S90 227 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 USB1Q9BQ65 265 aaKnown RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 INPP5KQ9BT40 448 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 C1QTNF6Q9BXI9 259 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 DERL2Q9GZP9 239 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 DPAGT1Q9H3H5 408 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 DHRS7Q9Y394 339 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ANHXE9PGG2 379 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ACP5P13686 325 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 MTHFD2P13995 350 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 PLAG1Q6DJT9 500 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ZNF613Q6PF04 617 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 GDPGP1Q6ZNW5 385 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 KIAA0907Q7Z7F0 614 aaPredicted RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 AMZ2Q86W34 360 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ZNF578Q96N58 590 aaPredicted RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 NXF2Q9GZY0 626 aaKnown RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 SCML1Q9UN30 329 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 OR1A2Q9Y585 309 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 TTC28Q96AY4 2481 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 NUP214P35658 2090 aaPredicted RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 MAGEB17A8MXT2 336 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 H7C0S8 307 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 RPS17P08708 135 aaKnown RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 TNFRSF1BP20333 461 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 SOAT1P35610 550 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 MAGEA2P43356 314 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 SF3A2Q15428 464 aaKnown RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 ENPP7Q6UWV6 458 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 Q6ZS52 159 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 LINC00469Q8N7U9 141 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 OR10Z1Q8NGY1 313 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 PDLIM5Q96HC4 596 aaKnown RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 RSPH9Q9H1X1 276 aaPredicted RBP10.32□□□□□ -0.76
LSM3-201ENST00000306024 KLHL1Q9NR64 748 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 ENAMQ9NRM1 1142 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 EXTL2Q9UBQ6 330 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 CABIN1Q9Y6J0 2220 aa10.32□□□□□ -0.76
LSM3-201ENST00000306024 OR10H3O60404 316 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 SOX14O95416 240 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 PAHP00439 452 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 EPB42P16452 691 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 PREPP48147 710 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 RPIAP49247 311 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 DSG2Q14126 1118 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 MFSD13AQ14CX5 517 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 ZNF79Q15937 498 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 LEXMQ3ZCV2 418 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 IDNKQ5T6J7 187 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 HSDL2Q6YN16 418 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 GOLGA7Q7Z5G4 137 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 LINC00518Q8N0U6 118 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 FANK1Q8TC84 345 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 PIGKQ92643 395 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 MARC2Q969Z3 335 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 FUBP1Q96AE4 644 aaKnown RBP10.31□□□□□ -0.76
LSM3-201ENST00000306024 TMEM168Q9H0V1 697 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 SDHAF2Q9NX18 166 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 TAS2R7Q9NYW3 318 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 COPS3Q9UNS2 423 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 V9GYH0 126 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 hCG_1807616A0A1W2PRN6 198 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 GSAPA4D1B5 854 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 C5orf58C9J3I9 102 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 K7EQS6 105 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 GNB5O14775 395 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 PCDH17O14917 1159 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 HPGDSO60760 199 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 RASGRP1O95267 797 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 SEMA4FO95754 770 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 GDF5P43026 501 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 CAPZA2P47755 286 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 NTRK2Q16620 822 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 BEST4Q8NFU0 473 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 EID2BQ96D98 161 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 C12orf66Q96MD2 445 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 HDAC8Q9BY41 377 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 KCNH6Q9H252 994 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 IMP3Q9NV31 184 aaKnown RBP10.31□□□□□ -0.76
LSM3-201ENST00000306024 PTGFRNQ9P2B2 879 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 MMP17Q9ULZ9 603 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 MGAT4BQ9UQ53 548 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 MIA3Q5JRA6 1907 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 ZNF98A6NK75 572 aa10.31□□□□□ -0.76
LSM3-201ENST00000306024 ZNF670-ZNF695F2Z2N8 137 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms