RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 SLC25A30Q5SVS4 291 aa5.01□□□□□ -1.61
SCN1A-201ENST00000303395 LARP4Q71RC2 724 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCN1A-201ENST00000303395 ZNF101Q8IZC7 436 aa5.01□□□□□ -1.61
SCN1A-201ENST00000303395 BPIFB1Q8TDL5 484 aa5.01□□□□□ -1.61
SCN1A-201ENST00000303395 MUS81Q96NY9 551 aa5.01□□□□□ -1.61
SCN1A-201ENST00000303395 OR14A2Q96R54 314 aa5.01□□□□□ -1.61
SCN1A-201ENST00000303395 SLC38A3Q99624 504 aa5.01□□□□□ -1.61
SCN1A-201ENST00000303395 OR51J1Q9H342 316 aa5.01□□□□□ -1.61
SCN1A-201ENST00000303395 LUZP4Q9P127 313 aa5.01□□□□□ -1.61
SCN1A-201ENST00000303395 ANKRD63C9JTQ0 380 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 H7C417 338 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 LGALS2P05162 132 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SLC2A5P22732 501 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ITPKAP23677 461 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 DCTP40126 519 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 RFC3P40938 356 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 RPL34P49207 117 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 NTRK2Q16620 822 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SLC22A25Q6T423 547 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 LINGO2Q7L985 606 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SLC46A3Q7Z3Q1 461 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ZNF454Q8N9F8 522 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 OR1M1Q8NGA1 313 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 NANPQ8TBE9 248 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 POM121Q96HA1 1249 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 FCRL2Q96LA5 508 aaPredicted RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 PGLYRP2Q96PD5 576 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 G6PC3Q9BUM1 346 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 TMED9Q9BVK6 235 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 EPHX3Q9H6B9 360 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 WDR6Q9NNW5 1121 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 ASAH2Q9NR71 780 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 GFOD1Q9NXC2 390 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ZMAT5Q9UDW3 170 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 SCML2Q9UQR0 700 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 TP53TG5Q9Y2B4 290 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ATAD5Q96QE3 1844 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 MEIOCA2RUB1 952 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 GATCO43716 136 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 GBAP04062 536 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SLC35E2BP0CK96 405 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 CD1DP15813 335 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 AKR1C4P17516 323 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 TYRP1P17643 537 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ADORA2AP29274 412 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 MZT1Q08AG7 82 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ILKQ13418 452 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ACSM3Q53FZ2 586 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 STEAP3Q658P3 488 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 TANGO2Q6ICL3 276 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ANKRD16Q6P6B7 361 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ZNF704Q6ZNC4 412 aaPredicted RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 ERN2Q76MJ5 926 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 NKAIN3Q8N8D7 197 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 OR2T4Q8NH00 348 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 NEIL3Q8TAT5 605 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 UBA3Q8TBC4 463 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 HGDQ93099 445 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 CD244Q9BZW8 370 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 PHPT1Q9NRX4 125 aaPredicted RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 PAQR5Q9NXK6 330 aaPredicted RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 HAO2Q9NYQ3 351 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 CBY1Q9Y3M2 126 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 MARF1Q9Y4F3 1742 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 D6RAR5 112 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 PDHXO00330 501 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 RBBP9O75884 186 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SYNGR4O95473 234 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 FHP07954 510 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 CPN1P15169 458 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 HOXA9P31269 272 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 MAP2K6P52564 334 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 NUDT6P53370 316 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 HMGCS2P54868 508 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 CDK5R2Q13319 367 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SNTB2Q13425 540 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 PLK5Q496M5 336 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 IL34Q6ZMJ4 242 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SPATC1Q76KD6 591 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 CMC1Q7Z7K0 106 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 VRK3Q8IV63 474 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 ADGRF3Q8IZF5 1079 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 PQLC3Q8N755 202 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 FAM86B1Q8N7N1 296 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 GLYATL1Q969I3 302 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 RAB39BQ96DA2 213 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 MTFMTQ96DP5 389 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 TEX101Q9BY14 249 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 CWH43Q9H720 699 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 MOB1AQ9H8S9 216 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 QTRT2Q9H974 415 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 EIF3KQ9UBQ5 218 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 KIF26BQ2KJY2 2108 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SMAD6O43541 496 aaKnown RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 CLEC3BP05452 202 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SYPP08247 313 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 NFYAP23511 347 aaPredicted RBP5□□□□□ -1.61
SCN1A-201ENST00000303395 MAOBP27338 520 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 BLKP51451 505 aa5□□□□□ -1.61
SCN1A-201ENST00000303395 SORDQ00796 357 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms