RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 RABEPKQ7Z6M1 372 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 SLC44A2Q8IWA5 706 aaPredicted RBP11.23□□□□□ -0.61
TPM3-202ENST00000302206 OR4N5Q8IXE1 308 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 C8orf59Q8N0T1 100 aaPredicted RBP11.23□□□□□ -0.61
TPM3-202ENST00000302206 TMEM52Q8NDY8 209 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 SETD9Q8NE22 299 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 CHDHQ8NE62 594 aaPredicted RBP11.23□□□□□ -0.61
TPM3-202ENST00000302206 TSPAN14Q8NG11 270 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 ADAMTS15Q8TE58 950 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 HOXB13Q92826 284 aaPredicted RBP11.23□□□□□ -0.61
TPM3-202ENST00000302206 CTHRC1Q96CG8 243 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 MVB12AQ96EY5 273 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 ZC3H10Q96K80 434 aaKnown RBP11.23□□□□□ -0.61
TPM3-202ENST00000302206 MUS81Q96NY9 551 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 STACQ99469 402 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 BARD1Q99728 777 aaKnown RBP11.23□□□□□ -0.61
TPM3-202ENST00000302206 PIGUQ9H490 435 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 PARD6AQ9NPB6 346 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 ACER3Q9NUN7 267 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 KIF17Q9P2E2 1029 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 ACAD8Q9UKU7 415 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 SATB2Q9UPW6 733 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 CLCA2Q9UQC9 943 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 SH3GLB1Q9Y371 365 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 TESMINQ9Y4I5 508 aa11.23□□□□□ -0.61
TPM3-202ENST00000302206 A0A087WXM4 84 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 A0A0A6YYC8 382 aaPredicted RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 SMIM31A0A1B0GVY4 71 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 FAM227AF5H4B4 570 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 H3BMH7 237 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 I3L1I5 382 aaPredicted RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 CLDN4O14493 209 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 COQ9O75208 318 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 GADD45GO95257 159 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 MED26O95402 600 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 OXSR1O95747 527 aaPredicted RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 LGI1O95970 557 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 AK1P00568 194 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 CTSBP07858 339 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 PABPC4LP0CB38 370 aaKnown RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 TNFRSF1BP20333 461 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 NT5EP21589 574 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 CD1CP29017 333 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 CNR2P34972 360 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 PPM1FP49593 454 aaPredicted RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 NR1H2P55055 460 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 TOP3AQ13472 1001 aaPredicted RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 LPAL2Q16609 132 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 ARHGAP11BQ3KRB8 267 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 GPAT3Q53EU6 434 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 COLEC12Q5KU26 742 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 RBM48Q5RL73 367 aaKnown RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 ZNF691Q5VV52 312 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 NKAIN2Q5VXU1 208 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 DHRS4L2Q6PKH6 230 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 SPAG17Q6Q759 2223 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 C16orf62Q7Z3J2 963 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 PKD1L2Q7Z442 2459 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 ZNF786Q8N393 782 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 D2HGDHQ8N465 521 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 CDRT4Q8N9R6 151 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 FAM181AQ8N9Y4 354 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 ATG16L2Q8NAA4 619 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 OR10G2Q8NGC3 310 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 OR4C6Q8NH72 309 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 ADAMTS16Q8TE57 1224 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 FBLIM1Q8WUP2 373 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 HDAC2Q92769 488 aaKnown RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 COL26A1Q96A83 441 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 SLC35A4Q96G79 324 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 SLC41A2Q96JW4 573 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 ZNF578Q96N58 590 aaPredicted RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 PELOQ9BRX2 385 aaKnown RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 YIPF4Q9BSR8 244 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 GABARAPL3Q9BY60 117 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 GRIP2Q9C0E4 1043 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 SLC38A1Q9H2H9 487 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 MTHFD2LQ9H903 347 aaPredicted RBP11.22□□□□□ -0.61
TPM3-202ENST00000302206 POLE3Q9NRF9 147 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 DUSP22Q9NRW4 184 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 KRT84Q9NSB2 600 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 MAT2BQ9NZL9 334 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 ENOPH1Q9UHY7 261 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 SLC9A8Q9Y2E8 581 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 IFT52Q9Y366 437 aa11.22□□□□□ -0.61
TPM3-202ENST00000302206 BCKDKO14874 412 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 ZNF749O43361 778 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 LRP3O75074 770 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 LDB3O75112 727 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 ALPPP05187 535 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 TFAP2AP05549 437 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 ALOX5P09917 674 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 LINGO3P0C6S8 592 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 ACP2P11117 423 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 PRKAR1BP31321 381 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 PTGER1P34995 402 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 PIGAP37287 484 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 MAP3K8P41279 467 aa11.21□□□□□ -0.61
TPM3-202ENST00000302206 GCGRP47871 477 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms