RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ALG11Q2TAA5 492 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 Q6ZSR6 202 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 OR9A2Q8NGT5 310 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 NEDD4LQ96PU5 975 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 DEPDC7Q96QD5 511 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 GABARAPL3Q9BY60 117 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 ADAM29Q9UKF5 820 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 TNFRSF10AO00220 468 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 CTSVO60911 334 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 CCNB2O95067 398 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 RPLP0P05388 317 aaKnown RBP20.63■□□□□ 0.89
TPM4-201ENST00000300933 ATXN8OSP0DMR3 200 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 CHRNB1P11230 501 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 FAM209AQ5JX71 171 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 SLC44A3Q8N4M1 653 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 TTLQ8NG68 377 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 PITX2Q99697 317 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 FAIM2Q9BWQ8 316 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 PITHD1Q9GZP4 211 aaPredicted RBP20.63■□□□□ 0.89
TPM4-201ENST00000300933 KIR3DX1Q9H7L2 352 aa20.63■□□□□ 0.89
TPM4-201ENST00000300933 OR6C74A6NCV1 312 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 CTDSP2O14595 271 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 HNRNPA2B1P22626 353 aaKnown RBP20.62■□□□□ 0.89
TPM4-201ENST00000300933 NTSP30990 170 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 MC3RP41968 323 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 DEFB134Q4QY38 66 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 TMEM35AQ53FP2 167 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 SNAP47Q5SQN1 464 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 ZNF425Q6IV72 752 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 ZNF544Q6NX49 715 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 FBXO42Q6P3S6 717 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 NRARPQ7Z6K4 114 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 OR13H1Q8NG92 308 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 OR7G1Q8NGA0 311 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 APOBEC4Q8WW27 367 aaKnown RBP20.62■□□□□ 0.89
TPM4-201ENST00000300933 MSLNLQ96KJ4 702 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 TMEM246Q9BRR3 403 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 ZNF556Q9HAH1 456 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 ACSS1Q9NUB1 689 aaPredicted RBP20.62■□□□□ 0.89
TPM4-201ENST00000300933 DPM1O60762 260 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 RHCEP18577 417 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 IGFBP4P22692 258 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 GGT2P36268 569 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 SRP54P61011 504 aaKnown RBP20.62■□□□□ 0.89
TPM4-201ENST00000300933 ID2Q02363 134 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 GPR18Q14330 331 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 CCDC58Q4VC31 144 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 ZNF605Q86T29 641 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 ZNF675Q8TD23 568 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 SIGLEC11Q96RL6 698 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 ROGDIQ9GZN7 287 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 GPR83Q9NYM4 423 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 HCN4Q9Y3Q4 1203 aa20.62■□□□□ 0.89
TPM4-201ENST00000300933 LOC105369274A0A096LPK9 316 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 LOC102723532A0A0G2JNH3 316 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 LOC110117498-PIK3R3F6TDL0 507 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 P2RX6O15547 441 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 FRS3O43559 492 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 TBX19O60806 448 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 NTN1O95631 604 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 CHRM4P08173 479 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 ANXA8P13928 327 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 DRD2P14416 443 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 PTGES3Q15185 160 aaKnown RBP20.61■□□□□ 0.89
TPM4-201ENST00000300933 NRROSQ86YC3 692 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 GALNT12Q8IXK2 581 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 OR4N4Q8N0Y3 316 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 CACTIN-AS1Q8N1I8 211 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 SMRP1Q8NCR6 262 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 GDF15Q99988 308 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 ZNF226Q9NYT6 803 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 CENPXA8MT69 81 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 ABATP80404 500 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 C1orf61Q13536 156 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 SLC46A3Q7Z3Q1 461 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 MFSD9Q8NBP5 474 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 ZNF576Q9H609 170 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 SEMA3GQ9NS98 782 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 TAS2R7Q9NYW3 318 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 OR6C2Q9NZP2 312 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 KLF15Q9UIH9 416 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 STSP08842 583 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 PRKCAP17252 672 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 AHRP35869 848 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 LIMS1P48059 325 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 FUT5Q11128 374 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 KRR1Q13601 381 aaKnown RBP20.61■□□□□ 0.89
TPM4-201ENST00000300933 GPAT3Q53EU6 434 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 MRM1Q6IN84 353 aaKnown RBP20.61■□□□□ 0.89
TPM4-201ENST00000300933 PAQR7Q86WK9 346 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 RLN3Q8WXF3 142 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 GAS2L1Q99501 681 aaPredicted RBP20.61■□□□□ 0.89
TPM4-201ENST00000300933 SDHCQ99643 169 aaPredicted RBP20.61■□□□□ 0.89
TPM4-201ENST00000300933 PAQR5Q9NXK6 330 aaPredicted RBP20.61■□□□□ 0.89
TPM4-201ENST00000300933 TAS2R16Q9NYV7 291 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 SNX7Q9UNH6 387 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 POFUT2Q9Y2G5 429 aa20.61■□□□□ 0.89
TPM4-201ENST00000300933 CENPBD1B2RD01 187 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 TFECO14948 347 aaPredicted RBP20.6■□□□□ 0.89
TPM4-201ENST00000300933 PROM1O43490 865 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms