RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CDC42P60953 191 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 MAT1AQ00266 395 aaKnown RBP13.66□□□□□ -0.22
SMG8-201ENST00000300917 ATAD3BQ5T9A4 648 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 PARGQ86W56 976 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 DNAJC22Q8N4W6 341 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 TCEANCQ8N8B7 351 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 PSMA8Q8TAA3 256 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 TBC1D15Q8TC07 691 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 ASB12Q8WXK4 309 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 RERGLQ9H628 205 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 RNF167Q9H6Y7 350 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 WSB2Q9NYS7 404 aaPredicted RBP13.66□□□□□ -0.22
SMG8-201ENST00000300917 HCN3Q9P1Z3 774 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 USP36Q9P275 1121 aaKnown RBP13.66□□□□□ -0.22
SMG8-201ENST00000300917 SLC9B1P1A6NJY1 282 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 LIPAP38571 399 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 NNATQ16517 81 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 PGBD2Q6P3X8 592 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 P2RY8Q86VZ1 359 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 SNX29P2Q8IUI4 249 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 SLC30A8Q8IWU4 369 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 CAMKVQ8NCB2 501 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 LMX1AQ8TE12 382 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 ZNF566Q969W8 418 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 DOK1Q99704 481 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 TIMMDC1Q9NPL8 285 aa13.66□□□□□ -0.22
SMG8-201ENST00000300917 A0A0A6YYC8 382 aaPredicted RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 KRBA1A5PL33 1030 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 I3L1I5 382 aaPredicted RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 M0R3G1 203 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 ZSCAN9O15535 394 aaPredicted RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 ENTPD6O75354 484 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 CH25HO95992 272 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 PTHP01270 115 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 ALPPP05187 535 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 HOXC4P09017 264 aaPredicted RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 CHRNB1P11230 501 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 CKMT1AP12532 417 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 TLX1P31314 330 aaPredicted RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 MED22Q15528 200 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 CTF1Q16619 201 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 DUSP5Q16690 384 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 ZNF770Q6IQ21 691 aaPredicted RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 GPBAR1Q8TDU6 330 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 LRRC61Q9BV99 259 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 EGLN3Q9H6Z9 239 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 LYARQ9NX58 379 aaKnown RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 ENPP5Q9UJA9 477 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 HSPE1-MOB4S4R3N1 261 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 GKN3PP0CG01 181 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 MYF5P13349 255 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 MMP11P24347 488 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 HMGA2P52926 109 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 ELOAQ14241 798 aaKnown RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 MLC1Q15049 377 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 ZER1Q7Z7L7 766 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 ABTB1Q969K4 478 aaPredicted RBP13.65□□□□□ -0.22
SMG8-201ENST00000300917 PSORS1C1Q9UIG5 152 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 GPR52Q9Y2T5 361 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 HS3ST3A1Q9Y663 406 aa13.65□□□□□ -0.22
SMG8-201ENST00000300917 PNMA8CA0A1B0GUJ8 204 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 TLR4O00206 839 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 DPM1O60762 260 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 TRHRP34981 398 aaPredicted RBP13.65□□□□□ -0.23
SMG8-201ENST00000300917 DEFB133Q30KQ1 61 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 ABHD13Q7L211 337 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 PRSS48Q7RTY5 328 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 SLCO6A1Q86UG4 719 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 OOSP2Q86WS3 158 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 DSN1Q9H410 356 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 KCND3Q9UK17 655 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 PILRAQ9UKJ1 303 aa13.65□□□□□ -0.23
SMG8-201ENST00000300917 CLCA1A8K7I4 914 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 RGS8P57771 180 aaPredicted RBP13.64□□□□□ -0.23
SMG8-201ENST00000300917 RPS3AP61247 264 aaKnown RBP13.64□□□□□ -0.23
SMG8-201ENST00000300917 TUBA3CQ13748 450 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 OR52P1PQ8NH57 321 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 BBS10Q8TAM1 723 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 BAHD1Q8TBE0 780 aaPredicted RBP13.64□□□□□ -0.23
SMG8-201ENST00000300917 SERINC2Q96SA4 455 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 SARGQ9BW04 601 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 UBE2ZQ9H832 354 aaPredicted RBP13.64□□□□□ -0.23
SMG8-201ENST00000300917 FTSJ1Q9UET6 329 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 A0A1W2PPC4 97 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 SH3PXD2BA1X283 911 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 A8MVJ9 347 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 ZNF701M0R085 212 aaPredicted RBP13.64□□□□□ -0.23
SMG8-201ENST00000300917 TLX2O43763 284 aaPredicted RBP13.64□□□□□ -0.23
SMG8-201ENST00000300917 WNT1P04628 370 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 CT62P0C5K7 136 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 CPMP14384 443 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
SMG8-201ENST00000300917 RPS6KA3P51812 740 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 BMXP51813 675 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 TIGD6Q17RP2 521 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 NKAIN2Q5VXU1 208 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 MFSD12Q6NUT3 480 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 DGAT2L6Q6ZPD8 337 aa13.64□□□□□ -0.23
SMG8-201ENST00000300917 SVOPQ8N4V2 548 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms