RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 C1DQ13901 141 aaKnown RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 C22orf42Q6IC83 251 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 PLET1Q6UQ28 207 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 TMPRSS11AQ6ZMR5 421 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ZFAND1Q8TCF1 268 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 DOK4Q8TEW6 326 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ASB12Q8WXK4 309 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ARMC5Q96C12 935 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ZBED6CLQ96FA7 236 aaPredicted RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 LRR1Q96L50 414 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 HHATLQ9HCP6 504 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 SPIN1Q9Y657 262 aaPredicted RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 TRPM6Q9BX84 2022 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 OTOL1A6NHN0 477 aaPredicted RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 HMGN4O00479 90 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 MPZL2O60487 215 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 OPRD1P41143 372 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 QPRTQ15274 297 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ATAT1Q5SQI0 421 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 OR2G6Q5TZ20 316 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 PODNL1Q6PEZ8 512 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 CFAP77Q6ZQR2 320 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 RRM2BQ7LG56 351 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 NRSN1Q8IZ57 195 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 MRPL43Q8N983 215 aaKnown RBP12.69□□□□□ -0.38
CTDP1-202ENST00000299543 OR2L2Q8NH16 312 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 GANCQ8TET4 914 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 SMURF1Q9HCE7 757 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 ZNF304Q9HCX3 659 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 SSR3Q9UNL2 185 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 KCNK6Q9Y257 313 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 KLK4Q9Y5K2 254 aa12.69□□□□□ -0.38
CTDP1-202ENST00000299543 SPINT1O43278 529 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 PRKYO43930 277 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 PLOD3O60568 738 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 PPP2R1BP30154 601 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 CCR8P51685 355 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 HMGA2P52926 109 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 CAV3P56539 151 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 GPR19Q15760 415 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 MLIPQ5VWP3 458 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 UNC5DQ6UXZ4 953 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 DCUN1D3Q8IWE4 304 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 HERVK_113Q902F9 699 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 COL26A1Q96A83 441 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 PAWRQ96IZ0 340 aaKnown RBP12.68□□□□□ -0.38
CTDP1-202ENST00000299543 HHIPL1Q96JK4 782 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 SLC35G5Q96KT7 338 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 C12orf66Q96MD2 445 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 RAD9AQ99638 391 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 C11orf54Q9H0W9 315 aaPredicted RBP12.68□□□□□ -0.38
CTDP1-202ENST00000299543 PAK6Q9NQU5 681 aaPredicted RBP12.68□□□□□ -0.38
CTDP1-202ENST00000299543 SCN3AQ9NY46 2000 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 OR5K3A6NET4 321 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 ADAP00813 363 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 GNRH1P01148 92 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 TSPAN19P0C672 248 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 SLC35G4P0C7Q5 338 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 ATXN8OSP0DMR3 200 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 ACADLP28330 430 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 NUDT1P36639 197 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 PRKCDQ05655 676 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 PYDC2Q56P42 97 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 ATCAYQ86WG3 371 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 LRRC56Q8IYG6 542 aaPredicted RBP12.68□□□□□ -0.38
CTDP1-202ENST00000299543 OR4K5Q8NGD3 323 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 SUSD6Q92537 303 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 SLC9A6Q92581 669 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 NEURL3Q96EH8 262 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 DPH7Q9BTV6 452 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 CCDC59Q9P031 241 aaKnown RBP12.68□□□□□ -0.38
CTDP1-202ENST00000299543 SLC13A4Q9UKG4 626 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 MKLN1Q9UL63 735 aa12.68□□□□□ -0.38
CTDP1-202ENST00000299543 HELZP42694 1942 aaKnown RBP12.68□□□□□ -0.38
CTDP1-202ENST00000299543 SH3D21A4FU49 640 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 PAK4O96013 591 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 CSTF2P33240 577 aaKnown RBP eCLIP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 RNF144AP50876 292 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 RAB8AP61006 207 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 CLVS2Q5SYC1 327 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 C9orf64Q5T6V5 341 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 ACSM5Q6NUN0 579 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 PGBD2Q6P3X8 592 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 COMTD1Q86VU5 262 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 FAM129CQ86XR2 697 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 OR8K5Q8NH50 307 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 GATAD2BQ8WXI9 593 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 TRIM43Q96BQ3 446 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 TMCO6Q96DC7 493 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 LRIG1Q96JA1 1093 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 FRMD6Q96NE9 622 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 TEFMQ96QE5 360 aaKnown RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 CDCA4Q9BXL8 241 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 SAV1Q9H4B6 383 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 CXXC1Q9P0U4 656 aaPredicted RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 MGAT4BQ9UQ53 548 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 RPL36Q9Y3U8 105 aaKnown RBP12.67□□□□□ -0.38
CTDP1-202ENST00000299543 IRAK3Q9Y616 596 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 DOCK9Q9BZ29 2069 aa12.67□□□□□ -0.38
CTDP1-202ENST00000299543 PDE9AO76083 593 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms