RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 DAPP1Q9UN19 280 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 SCN3AQ9NY46 2000 aa19.58■□□□□ 0.72
SMCO4-201ENST00000298966 A0A0G2JN53 185 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 HYKKA2RU49 373 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 VSTM2BA6NLU5 285 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 NME4O00746 187 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 PDPK1O15530 556 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 STAMBPO95630 424 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 STATHP02808 62 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 OR1D4P47884 311 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 SMSP52788 366 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 BNIP2Q12982 314 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 OR52E8Q6IFG1 317 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 CDH24Q86UP0 819 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 C7orf57Q8NEG2 295 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 TNIP2Q8NFZ5 429 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 NUDT8Q8WV74 236 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 OR5P2Q8WZ92 322 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 HAS2Q92819 552 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 CCDC124Q96CT7 223 aaKnown RBP19.57■□□□□ 0.72
SMCO4-201ENST00000298966 SLC39A3Q9BRY0 314 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 TEX10Q9NXF1 929 aaPredicted RBP19.57■□□□□ 0.72
SMCO4-201ENST00000298966 PRDM4Q9UKN5 801 aa19.57■□□□□ 0.72
SMCO4-201ENST00000298966 NCOA6Q14686 2063 aaPredicted RBP19.56■□□□□ 0.72
SMCO4-201ENST00000298966 NSG1A0A0A6YYJ2 146 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 EVPLLA8MZ36 301 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 H0YIG0 161 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 ENTPD5O75356 428 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 RASAL1O95294 804 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 HOXB9P17482 250 aaPredicted RBP19.56■□□□□ 0.72
SMCO4-201ENST00000298966 AGAP20933 346 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 CPN2P22792 545 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 MST1P26927 711 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 NTSP30990 170 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 SOX11P35716 441 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 AVPR1BP47901 424 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 ALDH9A1P49189 494 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 OCA2Q04671 838 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 TRAP1Q12931 704 aaKnown RBP19.56■□□□□ 0.72
SMCO4-201ENST00000298966 CAPRIN1Q14444 709 aaKnown RBP19.56■□□□□ 0.72
SMCO4-201ENST00000298966 RUNDC3AQ59EK9 446 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 SLC48A1Q6P1K1 146 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 METTL27Q8N6F8 245 aaPredicted RBP19.56■□□□□ 0.72
SMCO4-201ENST00000298966 AMER3Q8N944 861 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 BRIX1Q8TDN6 353 aaKnown RBP19.56■□□□□ 0.72
SMCO4-201ENST00000298966 ASB9Q96DX5 294 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 RAD21L1Q9H4I0 556 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 SLC35C2Q9NQQ7 365 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 CMTM6Q9NX76 183 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 TAS2R9Q9NYW1 312 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.56■□□□□ 0.72
SMCO4-201ENST00000298966 CDC14AQ9UNH5 594 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 MRPS2Q9Y399 296 aaKnown RBP19.56■□□□□ 0.72
SMCO4-201ENST00000298966 ATG4BQ9Y4P1 393 aa19.56■□□□□ 0.72
SMCO4-201ENST00000298966 A0A1W2PR48 441 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 A0A1W2PRB8 838 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 PRORSD1PA6NEY8 169 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 AIFM1O95831 613 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 PTPN6P29350 595 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 PPP2R1BP30154 601 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 LIM2P55344 173 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 RAB38P57729 211 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 TRIM25Q14258 630 aaKnown RBP19.55■□□□□ 0.72
SMCO4-201ENST00000298966 CEBPEQ15744 281 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 ZNF385BQ569K4 471 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 PRSS58Q8IYP2 241 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 SIRT6Q8N6T7 355 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 SUN3Q8TAQ9 357 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 STMN2Q93045 179 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 MIEF2Q96C03 454 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 C8orf44Q96CB5 159 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 MAPKAP1Q9BPZ7 522 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 MESP1Q9BRJ9 268 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 SPATA9Q9BWV2 254 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 DCLRE1BQ9H816 532 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 KCMF1Q9P0J7 381 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 VAPAQ9P0L0 249 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 SLAMF8Q9P0V8 285 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 C3orf18Q9UK00 162 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 UTS2RQ9UKP6 389 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 FBXW2Q9UKT8 454 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 MRPS33Q9Y291 106 aaKnown RBP19.55■□□□□ 0.72
SMCO4-201ENST00000298966 NAALAD2Q9Y3Q0 740 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 PCDHB14Q9Y5E9 798 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 MAU2Q9Y6X3 613 aa19.55■□□□□ 0.72
SMCO4-201ENST00000298966 ACOT8O14734 319 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 BCAS2O75934 225 aaPredicted RBP19.54■□□□□ 0.72
SMCO4-201ENST00000298966 MAGEA8P43361 318 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 KRTAP10-9P60411 292 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 ADORA2A-AS1P86434 159 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 SNCBQ16143 134 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 ANKRD26P1Q6NSI1 321 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 NDUFAF7Q7L592 441 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 ANKRD46Q86W74 232 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 OR4A15Q8NGL6 344 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 STT3BQ8TCJ2 826 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 PSMF1Q92530 271 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 TANKQ92844 425 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 C14orf79Q96F83 325 aa19.54■□□□□ 0.72
SMCO4-201ENST00000298966 C10orf90Q96M02 699 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms