RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 PCDH15Q96QU1 1955 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 PLOD3O60568 738 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 GASTP01350 101 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 GSSP48637 474 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 RPS6KA3P51812 740 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 CFHR1Q03591 330 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 SEC23BQ15437 767 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 LAIR1Q6GTX8 287 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 KCTD8Q6ZWB6 473 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 TSPYL5Q86VY4 417 aaPredicted RBP21.27■■□□□ 1
VSTM4-201ENST00000298454 Q8N9G6 341 aaPredicted RBP21.27■■□□□ 1
VSTM4-201ENST00000298454 BPIFB6Q8NFQ5 453 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 DHRS1Q96LJ7 313 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 PSD2Q9BQI7 771 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 PINK1Q9BXM7 581 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 TMEM9Q9P0T7 183 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 ACAD8Q9UKU7 415 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 SLC9A8Q9Y2E8 581 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 CEPT1Q9Y6K0 416 aa21.27■■□□□ 1
VSTM4-201ENST00000298454 A0A087WV62 115 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 SLC1A7O00341 560 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 H1F0P07305 194 aaKnown RBP21.26■□□□□ 0.99
VSTM4-201ENST00000298454 CBLP22681 906 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 ELAVL4P26378 380 aaKnown RBP21.26■□□□□ 0.99
VSTM4-201ENST00000298454 SEPHS1P49903 392 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 HPCAP84074 193 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 FAM53BQ14153 422 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 CCNJQ5T5M9 372 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 ZNF770Q6IQ21 691 aaPredicted RBP21.26■□□□□ 0.99
VSTM4-201ENST00000298454 ZNF773Q6PK81 442 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 HRASLS5Q96KN8 279 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 CSNK1G3Q9Y6M4 447 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 NSA2O95478 260 aaKnown RBP21.26■□□□□ 0.99
VSTM4-201ENST00000298454 AGR2O95994 175 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 RNH1P13489 461 aaKnown RBP21.26■□□□□ 0.99
VSTM4-201ENST00000298454 GLB1P16278 677 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 HOXA6P31267 233 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 PIGFQ07326 219 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 SLC13A2Q13183 592 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 FRRS1Q6ZNA5 592 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 ZNF675Q8TD23 568 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 CTHRC1Q96CG8 243 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 MMABQ96EY8 250 aaPredicted RBP21.26■□□□□ 0.99
VSTM4-201ENST00000298454 CD180Q99467 661 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 ZNF556Q9HAH1 456 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 GPR55Q9Y2T6 319 aaPredicted RBP21.26■□□□□ 0.99
VSTM4-201ENST00000298454 CHST2Q9Y4C5 530 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 TMEM184BQ9Y519 407 aaPredicted RBP21.26■□□□□ 0.99
VSTM4-201ENST00000298454 PCDHGA6Q9Y5G7 932 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 HSPE1-MOB4S4R3N1 261 aa21.26■□□□□ 0.99
VSTM4-201ENST00000298454 MUC3AQ02505 3323 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 NINQ8N4C6 2090 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 CCDC163A0A0D9SF12 145 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 OR2W5A6NFC9 320 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 TGFBR3LH3BV60 316 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 XPNPEP2O43895 674 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 ANGPTL1O95841 491 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 SLC35E2P0CK97 266 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 ATXN8OSP0DMR3 200 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 FMO3P31513 532 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 ZXDAP98168 799 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 NPTX1Q15818 432 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 ARHGAP11BQ3KRB8 267 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 SNAP47Q5SQN1 464 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 B3GNT8Q7Z7M8 397 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 PIGUQ9H490 435 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 POLR1BQ9H9Y6 1135 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 CTPS2Q9NRF8 586 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 RASSF1Q9NS23 344 aa21.25■□□□□ 0.99
VSTM4-201ENST00000298454 ARRDC5A6NEK1 342 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 FRS3O43559 492 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 OR10H2O60403 315 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 TPST2O60704 377 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 SPTBP11277 2137 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 SKP1P63208 163 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 PMS2P3Q13401 168 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 DCST1Q5T197 706 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 PRPF38BQ5VTL8 546 aaKnown RBP21.24■□□□□ 0.99
VSTM4-201ENST00000298454 TYW3Q6IPR3 259 aaKnown RBP21.24■□□□□ 0.99
VSTM4-201ENST00000298454 BORAQ6PGQ7 559 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 OR52P1PQ8NH57 321 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 PIK3R3Q92569 461 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 NMD3Q96D46 503 aaKnown RBP21.24■□□□□ 0.99
VSTM4-201ENST00000298454 CHRNA10Q9GZZ6 450 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 PAK1IP1Q9NWT1 392 aaPredicted RBP21.24■□□□□ 0.99
VSTM4-201ENST00000298454 TMCC3Q9ULS5 477 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 PTGES3LE9PB15 166 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 PCDHGA12O60330 932 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 UGT2B17O75795 530 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 HTR1AP08908 422 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 TOP3AQ13472 1001 aaPredicted RBP21.24■□□□□ 0.99
VSTM4-201ENST00000298454 MAD2L1BPQ15013 274 aaPredicted RBP21.24■□□□□ 0.99
VSTM4-201ENST00000298454 TCTE1Q5JU00 501 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 EXOSC6Q5RKV6 272 aaKnown RBP21.24■□□□□ 0.99
VSTM4-201ENST00000298454 GARNL3Q5VVW2 1013 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 BROXQ5VW32 411 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 SLC7A13Q8TCU3 470 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 SDF2Q99470 211 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 TSC22D3Q99576 134 aa21.24■□□□□ 0.99
VSTM4-201ENST00000298454 PRR14Q9BWN1 585 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms