RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MAT2BQ9NZL9 334 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 LIPT1Q9Y234 373 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 TMEM184BQ9Y519 407 aaPredicted RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 KCNE3Q9Y6H6 103 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 CCDC88CQ9P219 2028 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 BDP1A6H8Y1 2624 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 CHRM4P08173 479 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 FOLR1P15328 257 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 TNFRSF1BP20333 461 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 FPR1P21462 350 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 NT5EP21589 574 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 DNAJA1P31689 397 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 EIF2B2P49770 351 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 PPP1R8Q12972 351 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 ANKDD1AQ495B1 522 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 SLC36A3Q495N2 470 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 TRMT12Q53H54 448 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 BMP8AQ7Z5Y6 402 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 HS3ST5Q8IZT8 346 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 EID2Q8N6I1 236 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 ANKK1Q8NFD2 765 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 GPR32P1Q8NGA4 272 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 OR2I1PQ8NGU4 316 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 RASSF5Q8WWW0 418 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 NAT6Q93015 286 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 MVB12AQ96EY5 273 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 CNBD2Q96M20 576 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 RDH12Q96NR8 316 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 ZNF347Q96SE7 839 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 RBM4BQ9BQ04 359 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 RBM4Q9BWF3 364 aaKnown RBP14.54□□□□□ -0.08
LSM6-201ENST00000296581 BTBD2Q9BX70 525 aa14.54□□□□□ -0.08
LSM6-201ENST00000296581 LAMA1P25391 3075 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 A0A0G2JPF8 293 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 DUXAA6NLW8 204 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 A8MU76 341 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 HNRNPCL2B2RXH8 293 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 HNRNPCL3B7ZW38 293 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 BMP10O95393 424 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 AGR2O95994 175 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ANKRD34CP0C6C1 535 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 OCM2P0CE71 109 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 OCMP0CE72 109 aaPredicted RBP14.53□□□□□ -0.08
LSM6-201ENST00000296581 HNRNPCL4P0DMR1 293 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 KCNJ5P48544 419 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 MAPK10P53779 464 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 APOFQ13790 326 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 SYT16Q17RD7 645 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 HEPHL1Q6MZM0 1159 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ISLR2Q6UXK2 745 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ZNF574Q6ZN55 896 aaPredicted RBP14.53□□□□□ -0.08
LSM6-201ENST00000296581 DCDC5Q6ZRR9 648 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 TMPRSS9Q7Z410 1059 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 SIMC1Q8NDZ2 872 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 COL21A1Q96P44 957 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ZNF300Q96RE9 604 aaPredicted RBP14.53□□□□□ -0.08
LSM6-201ENST00000296581 RBCK1Q9BYM8 510 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ZNF696Q9H7X3 374 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 REEP1Q9H902 201 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 GIN1Q9NXP7 522 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 RSL24D1Q9UHA3 163 aaKnown RBP14.53□□□□□ -0.08
LSM6-201ENST00000296581 CLDN16Q9Y5I7 305 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 U3KQV3 271 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 MYOCOSA0A1B0GUC4 107 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 A0A1W2PQM1 296 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 CPNE6O95741 557 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 SYPP08247 313 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ITGA2P17301 1181 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 OR1E2P47887 323 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 KCNC4Q03721 635 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 MED25Q71SY5 747 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 KRT73Q86Y46 540 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ADAMTS15Q8TE58 950 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ZNF501Q96CX3 271 aaPredicted RBP14.53□□□□□ -0.08
LSM6-201ENST00000296581 SLC35A4Q96G79 324 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 TRNT1Q96Q11 434 aaKnown RBP14.53□□□□□ -0.08
LSM6-201ENST00000296581 EPYCQ99645 322 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 SMURF2Q9HAU4 748 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 PRTFDC1Q9NRG1 225 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 TBC1D23Q9NUY8 699 aa14.53□□□□□ -0.08
LSM6-201ENST00000296581 ATXN7L1Q9ULK2 861 aaPredicted RBP14.53□□□□□ -0.08
LSM6-201ENST00000296581 DSPPQ9NZW4 1301 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 TGFBR3LH3BV60 316 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 CLDN4O14493 209 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 ZNF749O43361 778 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 DNAJB5O75953 348 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 SNAP29O95721 258 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 CT62P0C5K7 136 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 THRBP10828 461 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 XCR1P46094 333 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 ARHGDIAP52565 204 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 HSD17B7P56937 341 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 CCL7P80098 99 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 MAP4K2Q12851 820 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 SLC13A2Q13183 592 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 GK3PQ14409 553 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 PUM1Q14671 1186 aaKnown RBP eCLIP14.52□□□□□ -0.08
LSM6-201ENST00000296581 ANGPT1Q15389 498 aa14.52□□□□□ -0.08
LSM6-201ENST00000296581 YOD1Q5VVQ6 348 aaPredicted RBP14.52□□□□□ -0.08
LSM6-201ENST00000296581 DHRSXQ8N5I4 330 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms