RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TRIML2Q8N7C3 387 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 APCDD1LQ8NCL9 501 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 MORN4Q8NDC4 146 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 C16orf52Q8NHV5 167 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 THAP3Q8WTV1 239 aaPredicted RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 HOPXQ9BPY8 73 aaPredicted RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 CPPED1Q9BRF8 314 aaPredicted RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 GPATCH1Q9BRR8 931 aaKnown RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 THUMPD3Q9BV44 507 aaKnown RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 SPAG4Q9NPE6 437 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 RAXQ9Y2V3 346 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 CHD8Q9HCK8 2581 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 CASQ2O14958 399 aaPredicted RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 PEX1O43933 1283 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 SLC6A2P23975 617 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 SOX11P35716 441 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 ST13P50502 369 aaKnown RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 PRR5P85299 388 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 NNATQ16517 81 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 SAMD4BQ5PRF9 694 aaKnown RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 C8orf82Q6P1X6 216 aaPredicted RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 TMEM64Q6YI46 380 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 RNF111Q6ZNA4 994 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 C16orf47Q6ZP98 133 aaPredicted RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 SPACA3Q8IXA5 215 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 CATSPER1Q8NEC5 780 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 OR5D16Q8NGK9 328 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 SFXN5Q8TD22 340 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 ASB9Q96DX5 294 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 NEURL3Q96EH8 262 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 CCNL2Q96S94 520 aaPredicted RBP14.07□□□□□ -0.16
CCDC140-201ENST00000295226 EFHD1Q9BUP0 239 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 FAM117AQ9C073 453 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 CMTM6Q9NX76 183 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 NTMQ9P121 344 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 USP22Q9UPT9 525 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 KCNE3Q9Y6H6 103 aa14.07□□□□□ -0.16
CCDC140-201ENST00000295226 TRBV11-1A0A0K0K1C0 115 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 PEX12O00623 359 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 STAMBPO95630 424 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 ETFAP13804 333 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 MATN1P21941 496 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 CRATP43155 626 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 SLC7A2P52569 658 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 MVDP53602 400 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 ZNF155Q12901 538 aaPredicted RBP14.06□□□□□ -0.16
CCDC140-201ENST00000295226 CHAF1BQ13112 559 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 C9orf40Q8IXQ3 194 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 SLC15A3Q8IY34 581 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 HORMAD2Q8N7B1 307 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 RNF148Q8N7C7 305 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 SLC16A11Q8NCK7 471 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 C7orf57Q8NEG2 295 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 OR56A1Q8NGH5 318 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 DNAJB8Q8NHS0 232 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 PYDC1Q8WXC3 89 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 SLC9A6Q92581 669 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 RAB8BQ92930 207 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 TMEM125Q96AQ2 219 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 SLC35G5Q96KT7 338 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 DPH1Q9BZG8 443 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 FOLH1BQ9HBA9 442 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 DKK4Q9UBT3 224 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 COPS7AQ9UBW8 275 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 HEMK1Q9Y5R4 338 aaPredicted RBP14.06□□□□□ -0.16
CCDC140-201ENST00000295226 LOC400499M0QZD8 3231 aa14.06□□□□□ -0.16
CCDC140-201ENST00000295226 TAF4O00268 1085 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 SLITRK5O94991 958 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 HPP00738 406 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 NPPAP01160 153 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 NUDT7P0C024 238 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 CEACAM7Q14002 265 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 TRIM25Q14258 630 aaKnown RBP14.05□□□□□ -0.16
CCDC140-201ENST00000295226 FCRLBQ6BAA4 426 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 MFSD12Q6NUT3 480 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 APLFQ8IW19 511 aaPredicted RBP14.05□□□□□ -0.16
CCDC140-201ENST00000295226 OR7G1Q8NGA0 311 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 ART5Q96L15 291 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 MS4A4EQ96PG1 132 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 GAL3ST4Q96RP7 486 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 ITPAQ9BY32 194 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 KLHL4Q9C0H6 718 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 OR51I1Q9H343 314 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 ADA2Q9NZK5 511 aa14.05□□□□□ -0.16
CCDC140-201ENST00000295226 PPIEQ9UNP9 301 aaKnown RBP14.05□□□□□ -0.16
CCDC140-201ENST00000295226 A0A1W2PQ72 361 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 SYNDIG1LA6NDD5 238 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 NME4O00746 187 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 PCDH17O14917 1159 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 PRAMEF2O60811 474 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 KRT75O95678 551 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 OR12D1P0DN82 309 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 ACP2P11117 423 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 ITGAMP11215 1152 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 ITPKBP27987 946 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 RGNQ15493 299 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 IRAK1BP1Q5VVH5 260 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 PLAG1Q6DJT9 500 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 UNQ6494/PRO21346Q6UXR6 183 aa14.04□□□□□ -0.16
CCDC140-201ENST00000295226 OLIG3Q7RTU3 272 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms