RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 EPHA8P29322 1005 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 AQP1P29972 269 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 TLX1P31314 330 aaPredicted RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 UGT2B10P36537 528 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 TGFBR2P37173 567 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 MANFP55145 182 aaKnown RBP15.79■□□□□ 0.12
CPSF4-201ENST00000292476 RAB8AP61006 207 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 TUBA1BP68363 451 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 SPIBQ01892 262 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ANGPTL8Q6UXH0 198 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 FAM92BQ6ZTR7 304 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 TUBA1AQ71U36 451 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ZNF605Q86T29 641 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 PLXDC1Q8IUK5 500 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 DNAJC22Q8N4W6 341 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 TMCO5AQ8N6Q1 288 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 CSNK1A1LQ8N752 337 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 KCT2Q8NC54 265 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ZNF556Q9HAH1 456 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 GIMAP4Q9NUV9 329 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 TESMINQ9Y4I5 508 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 CORINQ9Y5Q5 1042 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 SLC22A7Q9Y694 548 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 RNF215Q9Y6U7 377 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 ENPP4Q9Y6X5 453 aa15.79■□□□□ 0.12
CPSF4-201ENST00000292476 PVRP15151 417 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 ST6GAL1P15907 406 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 ALOX12P18054 663 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 RHCEP18577 417 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 NTSP30990 170 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 FRKP42685 505 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-201ENST00000292476 SMN1Q16637 294 aaKnown RBP15.78■□□□□ 0.12
CPSF4-201ENST00000292476 NDUFA9Q16795 377 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 SLC23A3Q6PIS1 610 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 CCDC81Q6ZN84 652 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 AHSA2Q719I0 299 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 LGI4Q8N135 537 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 SLC5A8Q8N695 610 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 CIDECQ96AQ7 238 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-201ENST00000292476 FCRL4Q96PJ5 515 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 MAPKAP1Q9BPZ7 522 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 MACROD1Q9BQ69 325 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 COPS4Q9BT78 406 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 EDEM2Q9BV94 578 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 IL21RQ9HBE5 538 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 A4GALTQ9NPC4 353 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 RASSF1Q9NS23 344 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 TEX10Q9NXF1 929 aaPredicted RBP15.78■□□□□ 0.12
CPSF4-201ENST00000292476 ZNF451Q9Y4E5 1061 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 A3GALT2U3KPV4 340 aa15.78■□□□□ 0.12
CPSF4-201ENST00000292476 A0A0G2JN53 185 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 SLC9B1P1A6NJY1 282 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 CLCA1A8K7I4 914 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 J3QRK9 145 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 MPZL2O60487 215 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 CER1O95813 267 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 EIF2S1P05198 315 aaKnown RBP15.77■□□□□ 0.12
CPSF4-201ENST00000292476 CDK1P06493 297 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 HNRNPCP07910 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
CPSF4-201ENST00000292476 ALDH4A1P30038 563 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 IDUAP35475 653 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 DSTNP60981 165 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 BNC1Q01954 994 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 RSPO4Q2I0M5 234 aaPredicted RBP15.77■□□□□ 0.12
CPSF4-201ENST00000292476 FRMPD2BQ6IN97 320 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 RNF130Q86XS8 419 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 MCATQ8IVS2 390 aaKnown RBP15.77■□□□□ 0.12
CPSF4-201ENST00000292476 OR6Q1Q8NGQ2 317 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 NEURL3Q96EH8 262 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 DACH2Q96NX9 599 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 MROQ9BYG7 248 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 KLHL25Q9H0H3 589 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 LYRM4Q9HD34 91 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 PDE7BQ9NP56 450 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 SLC35C2Q9NQQ7 365 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 KCND3Q9UK17 655 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 SLC6A14Q9UN76 642 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 ENTPD4Q9Y227 616 aa15.77■□□□□ 0.12
CPSF4-201ENST00000292476 FAM32AQ9Y421 112 aaKnown RBP15.77■□□□□ 0.12
CPSF4-201ENST00000292476 CEP250Q9BV73 2442 aa15.77■□□□□ 0.11
CPSF4-201ENST00000292476 PROM1O43490 865 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 NADKO95544 446 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-201ENST00000292476 SYPP08247 313 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CD36P16671 472 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 GABRB1P18505 474 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CERS1P27544 350 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 MAGEA8P43361 318 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 CDH12P55289 794 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 PCBP4P57723 403 aaKnown RBP15.76■□□□□ 0.11
CPSF4-201ENST00000292476 SHBQ15464 509 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 EXOC3L2Q2M3D2 409 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 HLA-BQ31612 363 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 TCTE1Q5JU00 501 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 SAXO2Q658L1 398 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 REEP3Q6NUK4 255 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 ADCK1Q86TW2 530 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 SLC35F3Q8IY50 421 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 C9orf43Q8TAL5 461 aaPredicted RBP15.76■□□□□ 0.11
CPSF4-201ENST00000292476 NDNFQ8TB73 568 aa15.76■□□□□ 0.11
CPSF4-201ENST00000292476 EXOSC8Q96B26 276 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms